RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 PRDM13Q9H4Q3 707 aa14.33□□□□□ -0.11
SYNE3-203ENST00000554873 ZCCHC3Q9NUD5 404 aaKnown RBP14.33□□□□□ -0.11
SYNE3-203ENST00000554873 CA14Q9ULX7 337 aa14.33□□□□□ -0.11
SYNE3-203ENST00000554873 TMEM72A0PK05 275 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 PPP2R1BP30154 601 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 OMPP47874 163 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 ST8SIA6P61647 398 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 ZNF239Q16600 458 aaKnown RBP14.33□□□□□ -0.12
SYNE3-203ENST00000554873 DEFB115Q30KQ5 88 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 OR10K2Q6IF99 312 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 OR2T33Q8NG76 320 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 OR4C16Q8NGL9 310 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 PIGXQ8TBF5 258 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 SMPDL3BQ92485 455 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 PMM1Q92871 262 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 HS6ST2Q96MM7 605 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 AMDHD1Q96NU7 426 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 WNT6Q9Y6F9 365 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 ZC3H12DA2A288 527 aaKnown RBP14.33□□□□□ -0.12
SYNE3-203ENST00000554873 RAB40ALP0C0E4 278 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 CTNNB1P35222 781 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 PPP2CBP62714 309 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 PPP2CAP67775 309 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 FOXK2Q01167 660 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 HGFACQ04756 655 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 FUT5Q11128 374 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 ZNF614Q8N883 585 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 RAB40AQ8WXH6 277 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 TFGQ92734 400 aaPredicted RBP14.33□□□□□ -0.12
SYNE3-203ENST00000554873 VWCEQ96DN2 955 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 NUS1Q96E22 293 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 HSPA12BQ96MM6 686 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 GAS2L1Q99501 681 aaPredicted RBP14.33□□□□□ -0.12
SYNE3-203ENST00000554873 IL21RQ9HBE5 538 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 NRIP3Q9NQ35 241 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 FAM96BQ9Y3D0 163 aa14.33□□□□□ -0.12
SYNE3-203ENST00000554873 HEATR5BQ9P2D3 2071 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 SFTA3P0C7M3 94 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 RAB5AP20339 215 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 SRSF4Q08170 494 aaKnown RBP14.32□□□□□ -0.12
SYNE3-203ENST00000554873 INPP5JQ15735 1006 aaPredicted RBP14.32□□□□□ -0.12
SYNE3-203ENST00000554873 VWA2Q5GFL6 755 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 KREMEN2Q8NCW0 462 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 SYNPRQ8TBG9 265 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 EDAQ92838 391 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 S100PBPQ96BU1 408 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 TUBA4BQ9H853 241 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 PELI2Q9HAT8 420 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 BCL2L10Q9HD36 194 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 HCFC2Q9Y5Z7 792 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 A0A0A6YYC8 382 aaPredicted RBP14.32□□□□□ -0.12
SYNE3-203ENST00000554873 BTBD17A6NE02 478 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 ACOD1A6NK06 481 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 I3L1I5 382 aaPredicted RBP14.32□□□□□ -0.12
SYNE3-203ENST00000554873 SULT2B1O00204 365 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 HIST1H1BP16401 226 aaKnown RBP14.32□□□□□ -0.12
SYNE3-203ENST00000554873 MPIP34949 423 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 GLP1RP43220 463 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 OR12D2P58182 307 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 MLC1Q15049 377 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 TAF13Q15543 124 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 PCGF3Q3KNV8 242 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 STEAP2Q8NFT2 490 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 ZNF514Q96K75 400 aaPredicted RBP14.32□□□□□ -0.12
SYNE3-203ENST00000554873 RHOFQ9HBH0 211 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 SLC23A2Q9UGH3 650 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 FBXL4Q9UKA2 621 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 GPR34Q9UPC5 381 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 PCDHGA1Q9Y5H4 931 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 KIAA1549LQ6ZVL6 1849 aa14.32□□□□□ -0.12
SYNE3-203ENST00000554873 GLOD5A6NK44 160 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 A6NLC8 198 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 IFITM5A6NNB3 132 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 NDUFS4O43181 175 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 FRS3O43559 492 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 PMS2P2O95744 297 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 CD74P04233 296 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 EPCAMP16422 314 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 ACKR3P25106 362 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 DDTP30046 118 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 PYCR1P32322 319 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 ANXA11P50995 505 aaKnown RBP14.31□□□□□ -0.12
SYNE3-203ENST00000554873 TAS2R41P59536 307 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 ZNF234Q14588 700 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 IRF4Q15306 451 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 AKIRIN2Q53H80 203 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 ENPP7Q6UWV6 458 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 UNQ6126/PRO20091Q6UXV3 157 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 DNM1P46Q6ZS02 220 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 GLB1L2Q8IW92 636 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 OR5AP2Q8NGF4 316 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 BBS10Q8TAM1 723 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 CCDC107Q8WV48 283 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 MALSU1Q96EH3 234 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 C1orf198Q9H425 327 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 EXO5Q9H790 373 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 ST6GALNAC2Q9UJ37 374 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 KCNE3Q9Y6H6 103 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 CDHR4A6H8M9 788 aa14.31□□□□□ -0.12
SYNE3-203ENST00000554873 CLDN4O14493 209 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms