RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 TLX2O43763 284 aaPredicted RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 CTAG2O75638 210 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 NDUFB2O95178 105 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 WNT11O96014 354 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 CSF2P04141 144 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 FAM157CP0CG43 387 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 PRKAR1AP10644 381 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 UBL4AP11441 157 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 LAMP2P13473 410 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 NME1P15531 152 aaKnown RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 SRMP19623 302 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 ADH6P28332 368 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 PYCR1P32322 319 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 NNMTP40261 264 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 CAPZBP47756 277 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 KCNJ3P48549 501 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 SEPHS1P49903 392 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 CASP9P55211 416 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 STARD6P59095 220 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 RAP2BP61225 183 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 MEF2AQ02078 507 aaPredicted RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 SURF2Q15527 256 aaPredicted RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 GFOD2Q3B7J2 385 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 SNAP47Q5SQN1 464 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 TANGO2Q6ICL3 276 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 SLC25A47Q6Q0C1 308 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 STAC2Q6ZMT1 411 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 SSX9Q7RTT3 188 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 BCDIN3DQ7Z5W3 292 aaKnown RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 GRASPQ7Z6J2 395 aaPredicted RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 CENPVQ7Z7K6 275 aaPredicted RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 SLC35F2Q8IXU6 374 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 CMTM4Q8IZR5 234 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 TAGAPQ8N103 731 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 IQCF1Q8N6M8 205 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 DTWD2Q8NBA8 298 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 RNF133Q8WVZ7 376 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 SPSB4Q96A44 273 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 SIPA1Q96FS4 1042 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 WDR92Q96MX6 357 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 IL17FQ96PD4 163 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 CNN2Q99439 309 aaKnown RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 MCHR1Q99705 422 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 SSX3Q99909 188 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 WDR77Q9BQA1 342 aaPredicted RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 NMES1Q9C002 83 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 GAREM1Q9H706 876 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 RASL12Q9NYN1 266 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 B3GAT1Q9P2W7 334 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 STEAP1Q9UHE8 339 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 TNFSF18Q9UNG2 199 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 CLCA2Q9UQC9 943 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 FEZF1A0PJY2 475 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 RAB19A4D1S5 217 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 FABP12A6NFH5 140 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 ANKUB1A6NFN9 424 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 OR6C70A6NIJ9 312 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 NPIPB11E5RHQ5 1161 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 PRAMEF26H0Y7S4 382 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 MS4A18H0YCH9 400 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 M0R129 80 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 SUSD5O60279 629 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 MAN1A2O60476 641 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 PRAMEF2O60811 474 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 CCNKO75909 580 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 NMBP08949 121 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 MDKP21741 143 aaPredicted RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 NTSR1P30989 418 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 THBS4P35443 961 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 FNTBP49356 437 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 RASGEF1BQ0VAM2 473 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 SRSF5Q13243 272 aaKnown RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 ALKBH1Q13686 389 aaKnown RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 MS4A18Q3C1V0 323 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 Q499Y3 187 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 KIAA0895LQ68EN5 471 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 JMJD6Q6NYC1 403 aaPredicted RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 NRMQ8IXM6 262 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 RAB42Q8N4Z0 105 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF655Q8N720 491 aaPredicted RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 NAT16Q8N8M0 369 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 OR5L2Q8NGL0 311 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 OR8K5Q8NH50 307 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 NEIL3Q8TAT5 605 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 ST8SIA4Q92187 359 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 GTPBP3Q969Y2 492 aaKnown RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 NXPE2Q96DL1 559 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 ABHD14BQ96IU4 210 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 FYTTD1Q96QD9 318 aaKnown RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 RHOFQ9HBH0 211 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 KLHL1Q9NR64 748 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 FBXO34Q9NWN3 711 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 TAS2R8Q9NYW2 309 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 FOXD3Q9UJU5 478 aaPredicted RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 ERVK-19Q9WJR5 959 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 CARD8Q9Y2G2 431 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 PCDHGA5Q9Y5G8 931 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 RAI1Q7Z5J4 1906 aaPredicted RBP3.1□□□□□ -1.91
SEC23A-207ENST00000554615 NINQ8N4C6 2090 aa3.1□□□□□ -1.91
SEC23A-207ENST00000554615 CCDC163A0A0D9SF12 145 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms