RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 TNFSF13O75888 250 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 MT-ND2P03891 347 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 OPN1LWP04000 364 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 TP53P04637 393 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-214ENST00000554604 EPXP11678 715 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 EIF1P41567 113 aaKnown RBP11.12□□□□□ -0.63
SHMT2-214ENST00000554604 ATP12AP54707 1039 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 GP2P55259 537 aaKnown RBP11.12□□□□□ -0.63
SHMT2-214ENST00000554604 SNRPGP62308 76 aaKnown RBP11.12□□□□□ -0.63
SHMT2-214ENST00000554604 RAC1P63000 192 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 ZNF117Q03924 483 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 DYNC1I2Q13409 638 aaKnown RBP11.12□□□□□ -0.63
SHMT2-214ENST00000554604 GPR68Q15743 365 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 KLHL26Q53HC5 615 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 ENTPD8Q5MY95 495 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 TMEM201Q5SNT2 666 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 CCDC103Q8IW40 242 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 CLIP4Q8N3C7 705 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 TMCO5AQ8N6Q1 288 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 LINC01560Q8TB33 94 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 GNPDA2Q8TDQ7 276 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 TRUB1Q8WWH5 349 aaKnown RBP11.12□□□□□ -0.63
SHMT2-214ENST00000554604 FCGR1BQ92637 280 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 ZNF845Q96IR2 970 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-214ENST00000554604 MCHR1Q99705 422 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 TMEM185BQ9H7F4 350 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 CLN6Q9NWW5 311 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 PAQR5Q9NXK6 330 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-214ENST00000554604 CARD8Q9Y2G2 431 aa11.12□□□□□ -0.63
SHMT2-214ENST00000554604 FREM1Q5H8C1 2179 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 A8MXE2 369 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 TPST2O60704 377 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 INMTO95050 263 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 SYNGR4O95473 234 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 PLGP00747 810 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-214ENST00000554604 CDK1P06493 297 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 NID1P14543 1247 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 GSSP48637 474 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 P2RX1P51575 399 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 CCR4P51679 360 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 SUMO3P55854 103 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-214ENST00000554604 FGFBP1Q14512 234 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 TBCEQ15813 527 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-214ENST00000554604 ZSWIM7Q19AV6 140 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 PDSS1Q5T2R2 415 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 UBE2UQ5VVX9 321 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 VWA1Q6PCB0 445 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 PLEKHM3Q6ZWE6 761 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 AHSA2Q719I0 299 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 ZER1Q7Z7L7 766 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 GGNQ86UU5 652 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 RANBP3LQ86VV4 465 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-214ENST00000554604 ANKRD13BQ86YJ7 626 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 OR10D3Q8NH80 312 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 ACOT11Q8WXI4 607 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-214ENST00000554604 GGHQ92820 318 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 STARD4Q96DR4 205 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 COPS4Q9BT78 406 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 ARMC7Q9H6L4 198 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 RNF122Q9H9V4 155 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 SLC25A19Q9HC21 320 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 ACOT13Q9NPJ3 140 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 CNOT2Q9NZN8 540 aaKnown RBP11.11□□□□□ -0.63
SHMT2-214ENST00000554604 NDRG3Q9UGV2 375 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 MCTS1Q9ULC4 181 aaKnown RBP11.11□□□□□ -0.63
SHMT2-214ENST00000554604 EDARQ9UNE0 448 aa11.11□□□□□ -0.63
SHMT2-214ENST00000554604 A0A087WUU8 490 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 EFCAB10A6NFE3 127 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 CPSF4LA6NMK7 179 aaKnown RBP11.1□□□□□ -0.63
SHMT2-214ENST00000554604 NPIPB9F8W1W9 429 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 TNFSF11O14788 317 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 CASKO14936 926 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 ZNF264O43296 627 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 FMO6PO60774 539 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 AQP8O94778 261 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 ATE1O95260 518 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 UBL4AP11441 157 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 PIPP12273 146 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-214ENST00000554604 CCNA2P20248 432 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 POU1F1P28069 291 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 SFTPDP35247 375 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 KIR2DL2P43627 348 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-214ENST00000554604 CTBP2P56545 445 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 TSPAN31Q12999 210 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 DAZAP2Q15038 168 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-214ENST00000554604 PDZK1Q5T2W1 519 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 TMEM236Q5W0B7 351 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 HBMQ6B0K9 141 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 CBLN3Q6UW01 205 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 ESPNLQ6ZVH7 1005 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 PTCHD4Q6ZW05 846 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 BTLAQ7Z6A9 289 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 OR2V1Q8NHB1 315 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 PIGXQ8TBF5 258 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 NRGNQ92686 78 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 YIPF6Q96EC8 236 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 Q96MT0 163 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 DACH2Q96NX9 599 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 NPAS1Q99742 590 aa11.1□□□□□ -0.63
SHMT2-214ENST00000554604 RHNO1Q9BSD3 238 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms