RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 A0A0B4J2E0 115 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 A0A1B0GX12 115 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 TRAPPC13A5PLN9 417 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 FAM166BA8MTA8 275 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 H0Y3Z8 333 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 H0YHG0 523 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 KLRC4-KLRK1H3BQV0 150 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 OVOL3O00110 214 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 CLOCKO15516 846 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 HNRNPRO43390 633 aaKnown RBP5.65□□□□□ -1.5
SCFD1-212ENST00000554486 EFNA2O43921 213 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 MGRN1O60291 552 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 CBR3O75828 277 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 WISP2O76076 250 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 OR5F1O95221 314 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 RASAL1O95294 804 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 NUDT14O95848 222 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 CST1P01037 141 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 H1F0P07305 194 aaKnown RBP5.65□□□□□ -1.5
SCFD1-212ENST00000554486 FCGR1AP12314 374 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 GP1BBP13224 206 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 ITGA2P17301 1181 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 TCEA1P23193 301 aaKnown RBP5.65□□□□□ -1.5
SCFD1-212ENST00000554486 DPP4P27487 766 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 GDF1P27539 372 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 SRD5A2P31213 254 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 RRM2P31350 389 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 UQCRC1P31930 480 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 SLC1A3P43003 542 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 IST1P53990 364 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 CDH12P55289 794 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 DSCR4P56555 118 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-212ENST00000554486 B3GALT5-AS1P59052 145 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 TAS2R41P59536 307 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 PPIAP62937 165 aaKnown RBP5.65□□□□□ -1.5
SCFD1-212ENST00000554486 SPIBQ01892 262 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 FOXF1Q12946 379 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 GANABQ14697 944 aaKnown RBP5.65□□□□□ -1.5
SCFD1-212ENST00000554486 ATP6AP1Q15904 470 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 ST3GAL2Q16842 350 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 NADK2Q4G0N4 442 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 WBP2NLQ6ICG8 309 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 OR2T5Q6IEZ7 315 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 RPUSD3Q6P087 351 aaKnown RBP5.65□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF613Q6PF04 617 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 TMEM179BQ7Z7N9 219 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 NKAIN4Q8IVV8 208 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 OFCC1Q8IZS5 231 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 CADM2Q8N3J6 435 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 TMEM251Q8N6I4 163 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 FAM83FQ8NEG4 500 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-212ENST00000554486 OR4C15Q8NGM1 316 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 OR5M1Q8NGP8 315 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 OR2T29Q8NH02 315 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF563Q8TA94 476 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 ADAMTS16Q8TE57 1224 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 ST8SIA1Q92185 356 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 STMN2Q93045 179 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 SLC41A3Q96GZ6 507 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 TAAR6Q96RI8 345 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF347Q96SE7 839 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 PRSS27Q9BQR3 290 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 FNDC11Q9BVV2 318 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 TTTY12Q9BZ98 90 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 OR2B2Q9GZK3 357 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 POLR2J2Q9GZM3 115 aaKnown RBP5.65□□□□□ -1.5
SCFD1-212ENST00000554486 POLR2J3Q9H1A7 115 aaKnown RBP5.65□□□□□ -1.5
SCFD1-212ENST00000554486 YY1AP1Q9H869 796 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 NMNAT1Q9HAN9 279 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-212ENST00000554486 NTN4Q9HB63 628 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 TMEM27Q9HBJ8 222 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 AGPAT4Q9NRZ5 378 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 RHCGQ9UBD6 479 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 DNAJB9Q9UBS3 223 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 OSGIN1Q9UJX0 560 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 PRDM4Q9UKN5 801 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 SLC7A7Q9UM01 511 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 VDAC3Q9Y277 283 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 B3GNT3Q9Y2A9 372 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 MRPS18CQ9Y3D5 142 aaKnown RBP5.65□□□□□ -1.5
SCFD1-212ENST00000554486 FAM32AQ9Y421 112 aaKnown RBP5.65□□□□□ -1.5
SCFD1-212ENST00000554486 KALRNO60229 2985 aa5.65□□□□□ -1.51
SCFD1-212ENST00000554486 SPENQ96T58 3664 aaKnown RBP5.64□□□□□ -1.51
SCFD1-212ENST00000554486 IGKV1D-42A0A075B6H8 117 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 TMED7-TICAM2A0A0A6YYA0 188 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 TRBV4-1A0A0J9YWV2 114 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 A0A1W2PRQ8 180 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 TMEM72A0PK05 275 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 A1L4Q6 167 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 MGST3O14880 152 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 ADAMDEC1O15204 470 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 CHP2O43745 196 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 GADD45GO95257 159 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 BAG2O95816 211 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 LDLRP01130 860 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 IL6RP08887 468 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-212ENST00000554486 THRBP10828 461 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 ANPEPP15144 967 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 IL11P20809 199 aa5.64□□□□□ -1.51
SCFD1-212ENST00000554486 PTNP21246 168 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms