RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 OR2M2Q96R28 347 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 TEX12Q9BXU0 123 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 OR51V1Q9H2C8 321 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 CCDC86Q9H6F5 360 aaKnown RBP13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 AUNIPQ9H7T9 357 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 DLL4Q9NR61 685 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 SLC22A11Q9NSA0 550 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 NUP50Q9UKX7 468 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 A0A1W2PRG6 482 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 ZNF593O00488 134 aaPredicted RBP13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 SSNA1O43805 119 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 PPICP45877 212 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 NR0B1P51843 470 aaKnown RBP13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 HCCSP53701 268 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 BIKQ13323 160 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 MFSD13AQ14CX5 517 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 CD226Q15762 336 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 PHF19Q5T6S3 580 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 PRPF38BQ5VTL8 546 aaKnown RBP13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 CBLN3Q6UW01 205 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 APOOLQ6UXV4 268 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 MEPCEQ7L2J0 689 aaKnown RBP13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 ZNF527Q8NB42 609 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 OR5J2Q8NH18 312 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 STT3BQ8TCJ2 826 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 MARVELD3Q96A59 401 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 C4orf36Q96KX1 117 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 HS6ST2Q96MM7 605 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 TRIM2Q9C040 744 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 APMAPQ9HDC9 416 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 TRIM36Q9NQ86 728 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 MED17Q9NVC6 651 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 C14orf105Q9NVL8 296 aa13.36□□□□□ -0.27
PPP4R3A-201ENST00000554308 ADAMTS9Q9P2N4 1935 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 FER1L5A0AVI2 2057 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 TEX51A0A1B0GUA7 166 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 LRRN3E7EW58 273 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 SCRG1O75711 98 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 IGKV3-11P04433 115 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 GYPBP06028 91 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 H2AFB2P0C5Z0 115 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 SULT1A3P0DMM9 295 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 SULT1A4P0DMN0 295 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 ATF1P18846 271 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 GALNSP34059 522 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 PUDPQ08623 228 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 COL28A1Q2UY09 1125 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 THSD4Q6ZMP0 1018 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 SSX6Q7RTT6 188 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 CYB561A3Q8NBI2 242 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 DAZLQ92904 295 aaKnown RBP13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 PTP4A1Q93096 173 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 LCORQ96JN0 433 aaPredicted RBP13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 LRRN3Q9H3W5 708 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 UBQLN4Q9NRR5 601 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 MRPL39Q9NYK5 338 aaKnown RBP13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 PPIEQ9UNP9 301 aaKnown RBP13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 HEATR5AQ86XA9 2040 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 MEIKINA0A087WXM9 373 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 ADRB1P08588 477 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 NAT1P18440 290 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 GALP22466 123 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 KLHL26Q53HC5 615 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 HLA-DQA1Q5Y7H0 255 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 SFRP4Q6FHJ7 346 aaPredicted RBP13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 ULK3Q6PHR2 472 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 CHMP1BQ7LBR1 199 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 ZNF550Q7Z398 422 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 C9orf40Q8IXQ3 194 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 OR52L1Q8NGH7 329 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 CCDC74BQ96LY2 380 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 TNFRSF13CQ96RJ3 184 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 IFT27Q9BW83 186 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 JAM3Q9BX67 310 aa13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 METTL17Q9H7H0 456 aaPredicted RBP13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 MKKSQ9NPJ1 570 aaPredicted RBP13.35□□□□□ -0.27
PPP4R3A-201ENST00000554308 C17orf51A8MQB3 221 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 PNLIPP16233 465 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 F8A1P23610 371 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 BDH1Q02338 343 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 ACY1Q03154 408 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 GALEQ14376 348 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 TMEM44Q2T9K0 475 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 ACSM3Q53FZ2 586 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 TMEM255AQ5JRV8 349 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 RHBDD2Q6NTF9 364 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 Q6ZTK2 550 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 GALNT11Q8NCW6 608 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 OR2T35Q8NGX2 323 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 IFI44Q8TCB0 444 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 THAP3Q8WTV1 239 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 ORAI1Q96D31 301 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 PGLYRP3Q96LB9 341 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 CHIAQ9BZP6 476 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 COPS7AQ9UBW8 275 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 SCDO00767 359 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 TOX3O15405 576 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 OIP5O43482 229 aa13.34□□□□□ -0.27
PPP4R3A-201ENST00000554308 UTS2O95399 124 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms