RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 SULT2B1O00204 365 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 KPNA4O00629 521 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 IMPA2O14732 288 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 DNPH1O43598 174 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 MITFO75030 526 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 NPIPB7O75200 414 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 VAMP5O95183 116 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 NTN1O95631 604 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 PMS2P2O95744 297 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 ACTL6AO96019 429 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 IFNGP01579 166 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 CRYABP02511 175 aaKnown RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 SLPIP03973 132 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 HPNP05981 417 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 WT1P19544 449 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 MAKP20794 623 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 PAICSP22234 425 aaKnown RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 GRK5P34947 590 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 GGT2P36268 569 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 RPL4P36578 427 aaKnown RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 RPS5P46782 204 aaKnown RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 OR2B6P58173 313 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 RAC3P60763 192 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 CXCR4P61073 352 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 CDK5Q00535 292 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 MYBPC1Q00872 1141 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 IL5RAQ01344 420 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 TLE3Q04726 772 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 ZP4Q12836 540 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 SRSF6Q13247 344 aaKnown RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 PMS2P3Q13401 168 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 RAPSNQ13702 412 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 GINS1Q14691 196 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF169Q14929 603 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 PDK3Q15120 406 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 INAQ16352 499 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 SNAPC1Q16533 368 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 BCL2A1Q16548 175 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF74Q16587 644 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 TBR1Q16650 682 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 TMEM176BQ3YBM2 270 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 SYT14P1Q58G82 188 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 RBM48Q5RL73 367 aaKnown RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 C6orf52Q5T4I8 152 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF691Q5VV52 312 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 RAET1LQ5VY80 246 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 SLX4IPQ5VYV7 408 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 GPR139Q6DWJ6 353 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 TMEM225Q6GV28 225 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 SLC27A4Q6P1M0 643 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 ARSKQ6UWY0 536 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 UNQ6494/PRO21346Q6UXR6 183 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 TMPPEQ6ZT21 453 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 ESPNLQ6ZVH7 1005 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 PTCHD4Q6ZW05 846 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 H1FNTQ75WM6 255 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 HDDC2Q7Z4H3 204 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 NANOGNBQ7Z5D8 188 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 FAM109AQ8N4B1 249 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 SCAIQ8N9R8 606 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 ZFP62Q8NB50 900 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 FAM83FQ8NEG4 500 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 ATP6V1C2Q8NEY4 427 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 OR2T33Q8NG76 320 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 OR8J1Q8NGP2 316 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 OR51A7Q8NH64 312 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 PFN4Q8NHR9 129 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 POC1BQ8TC44 478 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 TAAR8Q969N4 342 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 SLC25A36Q96CQ1 311 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 CNBD2Q96M20 576 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 SFXN2Q96NB2 322 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 MUS81Q96NY9 551 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 TNFRSF13CQ96RJ3 184 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 BARD1Q99728 777 aaKnown RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 IFT27Q9BW83 186 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 TTTY12Q9BZ98 90 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 OR2B2Q9GZK3 357 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 OR52D1Q9H346 318 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 FN3KQ9H479 309 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 EXO5Q9H790 373 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 MEPEQ9NQ76 525 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 PNPLA3Q9NST1 481 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 TBC1D23Q9NUY8 699 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 ETAA1Q9NY74 926 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 MRPL39Q9NYK5 338 aaKnown RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 KLHL21Q9UJP4 597 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 TUBD1Q9UJT1 453 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 FBXL2Q9UKC9 423 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 BLOC1S6Q9UL45 172 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 NDRG4Q9ULP0 352 aaKnown RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 B3GALT5Q9Y2C3 310 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 RPH3AQ9Y2J0 694 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-202ENST00000553619 TPRKBQ9Y3C4 175 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 CDH10Q9Y6N8 788 aa4.5□□□□□ -1.69
VTI1B-202ENST00000553619 TRGV5A0A0B4J1U4 118 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 A0A1W2PRG6 482 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 IRGMA1A4Y4 181 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 OR2M5A3KFT3 312 aa4.49□□□□□ -1.69
VTI1B-202ENST00000553619 G3V3Y1 287 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms