RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 PIGFQ07326 219 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 KLHL26Q53HC5 615 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.8□□□□□ -1.32
PRIM1-208ENST00000552590 PRAMEF8Q5VWM4 474 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 PRAMEF7Q5VXH5 474 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 DUX4L9Q6RFH8 374 aaPredicted RBP6.8□□□□□ -1.32
PRIM1-208ENST00000552590 PEX26Q7Z412 305 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 C1orf52Q8N6N3 182 aaKnown RBP6.8□□□□□ -1.32
PRIM1-208ENST00000552590 OR6Y1Q8NGX8 325 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 OR2T6Q8NHC8 308 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 UBTD2Q8WUN7 234 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 TFAP2CQ92754 450 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 THOC1Q96FV9 657 aaKnown RBP6.8□□□□□ -1.32
PRIM1-208ENST00000552590 THUMPD3Q9BV44 507 aaKnown RBP6.8□□□□□ -1.32
PRIM1-208ENST00000552590 PCDHAC1Q9H158 963 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 SEMA6AQ9H2E6 1030 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 OR51B6Q9H340 312 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 INPP5EQ9NRR6 644 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 B3GNT2Q9NY97 397 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 DUX4Q9UBX2 424 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 ACOT9Q9Y305 439 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 HDGFL3Q9Y3E1 203 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 VPS13DQ5THJ4 4388 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 DMBT1Q9UGM3 2413 aaPredicted RBP6.8□□□□□ -1.32
PRIM1-208ENST00000552590 DNAH11Q96DT5 4516 aa6.8□□□□□ -1.32
PRIM1-208ENST00000552590 SLC22A23A1A5C7 686 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 TTC36A6NLP5 189 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 SUPT3HB4E1H0 165 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 H3BNH8 94 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 TM9SF1O15321 606 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 ZNF500O60304 480 aaPredicted RBP6.79□□□□□ -1.32
PRIM1-208ENST00000552590 UGDHO60701 494 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 SUPT3HO75486 399 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 HTR3BO95264 441 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 WISP3O95389 354 aaPredicted RBP6.79□□□□□ -1.32
PRIM1-208ENST00000552590 MT-ND5P03915 603 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 OPN1SWP03999 348 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 ACP2P11117 423 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 CD79AP11912 226 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 ZNF250P15622 560 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 CCNA2P20248 432 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 IVDP26440 423 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 PTDSS1P48651 473 aaKnown RBP6.79□□□□□ -1.32
PRIM1-208ENST00000552590 BTG1P62324 171 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 CBFBQ13951 182 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 FAM209AQ5JX71 171 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 TRMT10BQ6PF06 316 aaKnown RBP6.79□□□□□ -1.32
PRIM1-208ENST00000552590 GPAT4Q86UL3 456 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 ZC3HC1Q86WB0 502 aaKnown RBP6.79□□□□□ -1.32
PRIM1-208ENST00000552590 PDZD9Q8IXQ8 264 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 DDIASQ8IXT1 998 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 SPERTQ8NA61 448 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 SCCPDHQ8NBX0 429 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 OR4C13Q8NGP0 309 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 ADAMTS16Q8TE57 1224 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 IPCEF1Q8WWN9 437 aaPredicted RBP6.79□□□□□ -1.32
PRIM1-208ENST00000552590 RHOVQ96L33 236 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 ZNF75AQ96N20 296 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 FRG2BQ96QU4 278 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 NAA11Q9BSU3 229 aaPredicted RBP6.79□□□□□ -1.32
PRIM1-208ENST00000552590 NAT10Q9H0A0 1025 aaKnown RBP6.79□□□□□ -1.32
PRIM1-208ENST00000552590 GLIPR2Q9H4G4 154 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 SERHL2Q9H4I8 314 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 ALG9Q9H6U8 611 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 IPPKQ9H8X2 491 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 CAB39LQ9H9S4 337 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 CTPS2Q9NRF8 586 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 FARSBQ9NSD9 589 aaKnown RBP6.79□□□□□ -1.32
PRIM1-208ENST00000552590 NUDT4Q9NZJ9 180 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 TMEM181Q9P2C4 612 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 KIF17Q9P2E2 1029 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 CHRNA9Q9UGM1 479 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 RCE1Q9Y256 329 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 HSPG2P98160 4391 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 P2RY10O00398 339 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 EIF1BO60739 113 aaKnown RBP6.79□□□□□ -1.32
PRIM1-208ENST00000552590 CYP7B1O75881 506 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 LHBP01229 141 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 IMPDH2P12268 514 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 SLC6A2P23975 617 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 LCN1P31025 176 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 CFHR2P36980 270 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 ARL1P40616 181 aaPredicted RBP6.79□□□□□ -1.32
PRIM1-208ENST00000552590 PRKAG1P54619 331 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 PDE7AQ13946 482 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 RASA2Q15283 850 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 DUSP5Q16690 384 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 GSG1Q2KHT4 349 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 VPS26BQ4G0F5 336 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 SPANXN3Q5MJ09 141 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 FAM219BQ5XKK7 198 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 TTC19Q6DKK2 380 aaPredicted RBP6.79□□□□□ -1.32
PRIM1-208ENST00000552590 NIPAL3Q6P499 406 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 SBSPONQ8IVN8 264 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 ZNF614Q8N883 585 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 ST8SIA1Q92185 356 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 HOXB13Q92826 284 aaPredicted RBP6.79□□□□□ -1.32
PRIM1-208ENST00000552590 LHX4Q969G2 390 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 GPR78Q96P69 363 aa6.79□□□□□ -1.32
PRIM1-208ENST00000552590 BPIFA3Q9BQP9 254 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms