RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 RFXANKO14593 260 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 FZD7O75084 574 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 RP2O75695 350 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 CHRM4P08173 479 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 ZCCHC18P0CG32 403 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 CHI3L1P36222 383 aaPredicted RBP11.01□□□□□ -0.65
USP28-212ENST00000544750 ACAA2P42765 397 aaKnown RBP11.01□□□□□ -0.65
USP28-212ENST00000544750 ATP4BP51164 291 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 TMEM33P57088 247 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 BNIP2Q12982 314 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 MAPK11Q15759 364 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 SYPL1Q16563 259 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 TUSC1Q2TAM9 212 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 GPAT3Q53EU6 434 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 MRPL2Q5T653 305 aaKnown RBP11.01□□□□□ -0.65
USP28-212ENST00000544750 KRT80Q6KB66 452 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 CGB2Q6NT52 195 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 SHQ1Q6PI26 577 aaKnown RBP11.01□□□□□ -0.65
USP28-212ENST00000544750 BLOC1S3Q6QNY0 202 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 MDP1Q86V88 176 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 ANKFN1Q8N957 763 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 GTF2H4Q92759 462 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 RDH5Q92781 318 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 TRNT1Q96Q11 434 aaKnown RBP11.01□□□□□ -0.65
USP28-212ENST00000544750 TMPRSS13Q9BYE2 586 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 MS4A5Q9H3V2 200 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 NPHS2Q9NP85 383 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 ZNF275Q9NSD4 429 aaPredicted RBP11.01□□□□□ -0.65
USP28-212ENST00000544750 ADPRHL2Q9NX46 363 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 REV1Q9UBZ9 1251 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 PRDM4Q9UKN5 801 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 RASD1Q9Y272 281 aa11.01□□□□□ -0.65
USP28-212ENST00000544750 A8MVM7 634 aa11□□□□□ -0.65
USP28-212ENST00000544750 M0R233 179 aa11□□□□□ -0.65
USP28-212ENST00000544750 NCR1O76036 304 aa11□□□□□ -0.65
USP28-212ENST00000544750 ZNF35P13682 527 aa11□□□□□ -0.65
USP28-212ENST00000544750 CXCR1P25024 350 aa11□□□□□ -0.65
USP28-212ENST00000544750 SEC24CP53992 1094 aa11□□□□□ -0.65
USP28-212ENST00000544750 STX1BP61266 288 aa11□□□□□ -0.65
USP28-212ENST00000544750 MRPS11P82912 194 aaKnown RBP11□□□□□ -0.65
USP28-212ENST00000544750 DEFA6Q01524 100 aa11□□□□□ -0.65
USP28-212ENST00000544750 NPRL3Q12980 569 aa11□□□□□ -0.65
USP28-212ENST00000544750 FAHD2BQ6P2I3 314 aaPredicted RBP11□□□□□ -0.65
USP28-212ENST00000544750 SLC2A7Q6PXP3 512 aa11□□□□□ -0.65
USP28-212ENST00000544750 LRRC74BQ6ZQY2 392 aa11□□□□□ -0.65
USP28-212ENST00000544750 ZNF621Q6ZSS3 439 aa11□□□□□ -0.65
USP28-212ENST00000544750 C1QL2Q7Z5L3 287 aa11□□□□□ -0.65
USP28-212ENST00000544750 TRIML2Q8N7C3 387 aa11□□□□□ -0.65
USP28-212ENST00000544750 PNPT1Q8TCS8 783 aaKnown RBP11□□□□□ -0.65
USP28-212ENST00000544750 FAHD2AQ96GK7 314 aa11□□□□□ -0.65
USP28-212ENST00000544750 TAPBPLQ9BX59 468 aa11□□□□□ -0.65
USP28-212ENST00000544750 SUCNR1Q9BXA5 334 aa11□□□□□ -0.65
USP28-212ENST00000544750 PAIP1Q9H074 479 aaKnown RBP11□□□□□ -0.65
USP28-212ENST00000544750 CRLF2Q9HC73 371 aa11□□□□□ -0.65
USP28-212ENST00000544750 GPR35Q9HC97 309 aa11□□□□□ -0.65
USP28-212ENST00000544750 MYEF2Q9P2K5 600 aaKnown RBP11□□□□□ -0.65
USP28-212ENST00000544750 B3GAT1Q9P2W7 334 aa11□□□□□ -0.65
USP28-212ENST00000544750 RCE1Q9Y256 329 aa11□□□□□ -0.65
USP28-212ENST00000544750 CDHR4A6H8M9 788 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 DEAF1O75398 565 aaPredicted RBP10.99□□□□□ -0.65
USP28-212ENST00000544750 FSHBP01225 129 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 TFPTP0C1Z6 253 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 GKN3PP0CG01 181 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 HKR1P10072 659 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 TCN1P20061 433 aaPredicted RBP10.99□□□□□ -0.65
USP28-212ENST00000544750 GLRXP35754 106 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 MYBPC1Q00872 1141 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 FXNQ16595 210 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 CEACAM16Q2WEN9 425 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 PAGE3Q5JUK9 113 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 C1orf140Q5VVS0 124 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 PRAMEF8Q5VWM4 474 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 PRAMEF7Q5VXH5 474 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 SHISA2Q6UWI4 295 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 LRP11Q86VZ4 500 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 MSRB3Q8IXL7 192 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 CCDC36Q8IYA8 594 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 KDM8Q8N371 416 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 TEX29Q8N6K0 151 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 ITCHQ96J02 903 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 SLC6A7Q99884 636 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 PTDSS2Q9BVG9 487 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 CCDC134Q9H6E4 229 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 RMND5AQ9H871 391 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 MTHFD2LQ9H903 347 aaPredicted RBP10.99□□□□□ -0.65
USP28-212ENST00000544750 MED4Q9NPJ6 270 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 FGFR1OP2Q9NVK5 253 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 RLIMQ9NVW2 624 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 SLC25A37Q9NYZ2 338 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 CCDC167Q9P0B6 97 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 TANC2Q9HCD6 1990 aa10.99□□□□□ -0.65
USP28-212ENST00000544750 A0A096LPI6 279 aa10.98□□□□□ -0.65
USP28-212ENST00000544750 TRBV5-3A0A0A0MS03 114 aa10.98□□□□□ -0.65
USP28-212ENST00000544750 ATP8B1O43520 1251 aa10.98□□□□□ -0.65
USP28-212ENST00000544750 PNMTP11086 282 aa10.98□□□□□ -0.65
USP28-212ENST00000544750 ETFAP13804 333 aa10.98□□□□□ -0.65
USP28-212ENST00000544750 UQCRBP14927 111 aa10.98□□□□□ -0.65
USP28-212ENST00000544750 IL7RP16871 459 aa10.98□□□□□ -0.65
USP28-212ENST00000544750 ZNF14P17017 642 aaPredicted RBP10.98□□□□□ -0.65
USP28-212ENST00000544750 ALDH3B1P43353 468 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms