RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 NPIPA8P0DM63 369 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 VSIG8P0DPA2 414 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 BMP5P22003 454 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 MYF6P23409 242 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 CXCR1P25024 350 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 UQCRC1P31930 480 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 CEACAM8P31997 349 aaPredicted RBP5.89□□□□□ -1.47
CDCA3-209ENST00000544610 AQP4P55087 323 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 RPS4XP62701 263 aaKnown RBP5.89□□□□□ -1.47
CDCA3-209ENST00000544610 RAC1P63000 192 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 ADAM8P78325 824 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 SELENBP1Q13228 472 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 DAZAP2Q15038 168 aaPredicted RBP5.89□□□□□ -1.47
CDCA3-209ENST00000544610 SEC23BQ15437 767 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 BCL2A1Q16548 175 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 LRRC36Q1X8D7 754 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 ACSF3Q4G176 576 aaPredicted RBP5.89□□□□□ -1.47
CDCA3-209ENST00000544610 FAM69AQ5T7M9 428 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 C3orf33Q6P1S2 294 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 POMZP3Q6PJE2 187 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 TBPL2Q6SJ96 375 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 OLIG3Q7RTU3 272 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 BIVMQ86UB2 503 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 EGFL6Q8IUX8 553 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 NKAIN4Q8IVV8 208 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 TMCO5AQ8N6Q1 288 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 AQP11Q8NBQ7 271 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 NAXEQ8NCW5 288 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 ZNF555Q8NEP9 628 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 OR4K17Q8NGC6 315 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 MFSD8Q8NHS3 518 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 ZNF563Q8TA94 476 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 NEIL3Q8TAT5 605 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 FBLIM1Q8WUP2 373 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 RNASE6Q93091 150 aaKnown RBP5.89□□□□□ -1.47
CDCA3-209ENST00000544610 DDIT4LQ96D03 193 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 BPIFA2Q96DR5 249 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 APOL4Q9BPW4 351 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 RTN4RQ9BZR6 473 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 OR2B2Q9GZK3 357 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 EXO5Q9H790 373 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 SLC25A19Q9HC21 320 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 FAM118AQ9NWS6 357 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 PAQR5Q9NXK6 330 aaPredicted RBP5.89□□□□□ -1.47
CDCA3-209ENST00000544610 ALKBH4Q9NXW9 302 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 REV1Q9UBZ9 1251 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 ZNF629Q9UEG4 869 aaPredicted RBP5.89□□□□□ -1.47
CDCA3-209ENST00000544610 ZNF229Q9UJW7 825 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 OSGIN1Q9UJX0 560 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 PCDHB10Q9UN67 800 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 ZNF337Q9Y3M9 751 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 AP4B1Q9Y6B7 739 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 LOC100130705A0A1B0GUX0 176 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 SH3D21A4FU49 640 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 KDM4EB2RXH2 506 aaPredicted RBP5.88□□□□□ -1.47
CDCA3-209ENST00000544610 DVL2O14641 736 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 IMPA2O14732 288 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 FRS3O43559 492 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 SCO2O43819 266 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 AHCYL1O43865 530 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 EIF1BO60739 113 aaKnown RBP5.88□□□□□ -1.47
CDCA3-209ENST00000544610 PTP4A3O75365 173 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 VAMP5O95183 116 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 NUDT14O95848 222 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 HMGN1P05114 100 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 HPNP05981 417 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 CCDC159P0C7I6 412 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 ASAH2BP0C7U1 165 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 BMP7P18075 431 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 DPP4P27487 766 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 TACR3P29371 465 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 HOXC12P31275 282 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 TIMP3P35625 211 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 GGT2P36268 569 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 YAP1P46937 504 aaKnown RBP5.88□□□□□ -1.47
CDCA3-209ENST00000544610 CRISP1P54107 249 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 CDC42P60953 191 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 CDK5Q00535 292 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 CRYZQ08257 329 aaKnown RBP5.88□□□□□ -1.47
CDCA3-209ENST00000544610 ZP4Q12836 540 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 TMED1Q13445 227 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 DEFB113Q30KQ7 82 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 ZBED5Q49AG3 693 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 PRAMEF20Q5VT98 475 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 MEDAGQ5VYS4 303 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 SLX4IPQ5VYV7 408 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 FAM205BPQ63HN1 556 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 KLHL17Q6TDP4 642 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 ZNF620Q6ZNG0 422 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 NLRC3Q7RTR2 1065 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 ADGRG3Q86Y34 549 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 NRMQ8IXM6 262 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 C8orf59Q8N0T1 100 aaPredicted RBP5.88□□□□□ -1.47
CDCA3-209ENST00000544610 GALNT4Q8N4A0 578 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 WFDC11Q8NEX6 87 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 OR8J1Q8NGP2 316 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 OR52J3Q8NH60 311 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 ZNF566Q969W8 418 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 SGTBQ96EQ0 304 aa5.88□□□□□ -1.47
CDCA3-209ENST00000544610 LRRC46Q96FV0 321 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms