RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 GHDCQ8N2G8 530 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 TM9SF4Q92544 642 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 KISS1RQ969F8 398 aaPredicted RBP27.27■■□□□ 1.96
CCM2-219ENST00000544363 DCBLD2Q96PD2 775 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 B3GAT1Q9P2W7 334 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 DIMT1Q9UNQ2 313 aaKnown RBP27.27■■□□□ 1.96
CCM2-219ENST00000544363 EXOGQ9Y2C4 368 aaKnown RBP27.27■■□□□ 1.96
CCM2-219ENST00000544363 APC2O95996 2303 aa27.26■■□□□ 1.95
CCM2-219ENST00000544363 ACOT7O00154 380 aa27.26■■□□□ 1.95
CCM2-219ENST00000544363 EIF1BO60739 113 aaKnown RBP27.26■■□□□ 1.95
CCM2-219ENST00000544363 RAB36O95755 333 aa27.26■■□□□ 1.95
CCM2-219ENST00000544363 GYPBP06028 91 aa27.26■■□□□ 1.95
CCM2-219ENST00000544363 CD97P48960 835 aa27.26■■□□□ 1.95
CCM2-219ENST00000544363 STARP49675 285 aa27.26■■□□□ 1.95
CCM2-219ENST00000544363 RPS7P62081 194 aaKnown RBP27.26■■□□□ 1.95
CCM2-219ENST00000544363 H3F3AP84243 136 aa27.26■■□□□ 1.95
CCM2-219ENST00000544363 HSF1Q00613 529 aa27.26■■□□□ 1.95
CCM2-219ENST00000544363 DBPQ10586 325 aaPredicted RBP27.26■■□□□ 1.95
CCM2-219ENST00000544363 TBCEQ15813 527 aaPredicted RBP27.26■■□□□ 1.95
CCM2-219ENST00000544363 ESPNLQ6ZVH7 1005 aa27.26■■□□□ 1.95
CCM2-219ENST00000544363 ADCK1Q86TW2 530 aa27.26■■□□□ 1.95
CCM2-219ENST00000544363 FAM109AQ8N4B1 249 aa27.26■■□□□ 1.95
CCM2-219ENST00000544363 ZADH2Q8N4Q0 377 aa27.26■■□□□ 1.95
CCM2-219ENST00000544363 C9orf43Q8TAL5 461 aaPredicted RBP27.26■■□□□ 1.95
CCM2-219ENST00000544363 MUL1Q969V5 352 aa27.26■■□□□ 1.95
CCM2-219ENST00000544363 ZNF814B7Z6K7 855 aa27.25■■□□□ 1.95
CCM2-219ENST00000544363 XKRYO14609 159 aa27.25■■□□□ 1.95
CCM2-219ENST00000544363 DCKP27707 260 aa27.25■■□□□ 1.95
CCM2-219ENST00000544363 DAP3P51398 398 aaKnown RBP27.25■■□□□ 1.95
CCM2-219ENST00000544363 SLC25A1P53007 311 aa27.25■■□□□ 1.95
CCM2-219ENST00000544363 SLC16A1P53985 500 aa27.25■■□□□ 1.95
CCM2-219ENST00000544363 POU3F1Q03052 451 aaPredicted RBP27.25■■□□□ 1.95
CCM2-219ENST00000544363 SNX18Q96RF0 628 aa27.25■■□□□ 1.95
CCM2-219ENST00000544363 TUBA1CQ9BQE3 449 aa27.25■■□□□ 1.95
CCM2-219ENST00000544363 ACKR4Q9NPB9 350 aa27.25■■□□□ 1.95
CCM2-219ENST00000544363 PIEZO1Q92508 2521 aa27.25■■□□□ 1.95
CCM2-219ENST00000544363 NPIPA5E9PKD4 350 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 H0YC42 278 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 EIF1AYO14602 144 aaKnown RBP27.24■■□□□ 1.95
CCM2-219ENST00000544363 SEC14L5O43304 696 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 ARHGEF9O43307 516 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 DNPH1O43598 174 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 APOL3O95236 402 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 RENP00797 406 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 LGALS3BPQ08380 585 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 RAB39AQ14964 217 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 SLC10A1Q14973 349 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 RNLSQ5VYX0 342 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 TMEM225Q6GV28 225 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 B3GLCTQ6Y288 498 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 B3GNT6Q6ZMB0 384 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 SLC35D2Q76EJ3 337 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 GPR141Q7Z602 305 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 RORBQ92753 470 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 ADGRG7Q96K78 797 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 NAA11Q9BSU3 229 aaPredicted RBP27.24■■□□□ 1.95
CCM2-219ENST00000544363 MFRPQ9BY79 579 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 SLC6A15Q9H2J7 730 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 RPRD1BQ9NQG5 326 aaKnown RBP27.24■■□□□ 1.95
CCM2-219ENST00000544363 ASB6Q9NWX5 421 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 HAO2Q9NYQ3 351 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 NPIPA1Q9UND3 350 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 NOX1Q9Y5S8 564 aa27.24■■□□□ 1.95
CCM2-219ENST00000544363 K7ENP7 123 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 BCL10O95999 233 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 IFNGR1P15260 489 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 SPI1P17947 270 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 RAC3P60763 192 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 MELKQ14680 651 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 INO80CQ6PI98 192 aaPredicted RBP27.23■■□□□ 1.95
CCM2-219ENST00000544363 NHLRC1Q6VVB1 395 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 EXD3Q8N9H8 876 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 ASB10Q8WXI3 467 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 OXGR1Q96P68 337 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 TAS2R16Q9NYV7 291 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 NDUFA13Q9P0J0 144 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 SPTBN4Q9H254 2564 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 LOC102725191A0A1B0GVB3 256 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 ZNF99A8MXY4 864 aaPredicted RBP27.23■■□□□ 1.95
CCM2-219ENST00000544363 KLK2P20151 261 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 GSTT1P30711 240 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 ATP6V1E1P36543 226 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 SUCLG1P53597 346 aaKnown RBP27.23■■□□□ 1.95
CCM2-219ENST00000544363 SLC35D3Q5M8T2 416 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 HBMQ6B0K9 141 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 SHFQ7M4L6 423 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 UEVLDQ8IX04 471 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 UBQLNLQ8IYU4 475 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 OR4F15Q8NGB8 312 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 OR2V1Q8NHB1 315 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 FCGR1BQ92637 280 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 RASD1Q9Y272 281 aa27.23■■□□□ 1.95
CCM2-219ENST00000544363 SMIM31A0A1B0GVY4 71 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 A6NIZ1 184 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 H7C1C5 153 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 INMTO95050 263 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 AGFG1P52594 562 aaKnown RBP27.22■■□□□ 1.95
CCM2-219ENST00000544363 CARD18P57730 90 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 RAP1BP61224 184 aa27.22■■□□□ 1.95
CCM2-219ENST00000544363 LCN6P62502 163 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms