RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 CTNNA3Q9UI47 895 aa2.81□□□□□ -1.96
SCFD1-207ENST00000544052 ERVW-1Q9UQF0 538 aa2.81□□□□□ -1.96
SCFD1-207ENST00000544052 UBIAD1Q9Y5Z9 338 aa2.81□□□□□ -1.96
SCFD1-207ENST00000544052 PDCD11Q14690 1871 aaKnown RBP2.8□□□□□ -1.96
SCFD1-207ENST00000544052 BTBD17A6NE02 478 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 RGS16O15492 202 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-207ENST00000544052 SCGNO76038 276 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 GNA14O95837 355 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 CCNE2O96020 404 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 IMPDH1P20839 514 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 VDAC1P21796 283 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 GDF1P27539 372 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 FGF9P31371 208 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-207ENST00000544052 MDH2P40926 338 aaKnown RBP2.8□□□□□ -1.96
SCFD1-207ENST00000544052 LEPP41159 167 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 CEBPDP49716 269 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-207ENST00000544052 EFNB2P52799 333 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 RPS14P62263 151 aaKnown RBP2.8□□□□□ -1.96
SCFD1-207ENST00000544052 RPL32P62910 135 aaKnown RBP2.8□□□□□ -1.96
SCFD1-207ENST00000544052 SP4Q02446 784 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 NCBP1Q09161 790 aaKnown RBP2.8□□□□□ -1.96
SCFD1-207ENST00000544052 BST1Q10588 318 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 IFT88Q13099 833 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 CUL2Q13617 745 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 HIGD2BQ4VC39 106 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 DMRTC1Q5HYR2 192 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 LIPNQ5VXI9 398 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 OR2L13Q8N349 312 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 MAIP1Q8WWC4 291 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 TOP1MTQ969P6 601 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 TIMD4Q96H15 378 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 ZNF670Q9BS34 389 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 ROPN1BQ9BZX4 212 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-207ENST00000544052 B3GNT2Q9NY97 397 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 CSAG2Q9Y5P2 127 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 ANK1P16157 1881 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 ZDBF2Q9HCK1 2354 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 FANCMQ8IYD8 2048 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 IGLV3-22A0A075B6J6 115 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 XKRY2A2RUG3 117 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 SNTNA6NMZ2 147 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 RSPH10B2B2RC85 870 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 HIP1O00291 1037 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 DIRAS1O95057 198 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 THY1P04216 161 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 RSPH10BP0C881 870 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 POLR2MP0CAP2 368 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 DAP3P51398 398 aaKnown RBP2.8□□□□□ -1.96
SCFD1-207ENST00000544052 CD47Q08722 323 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 Q1RN00 199 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 TCEAL5Q5H9L2 206 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 OR2A2Q6IF42 318 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 C2orf66Q6UXQ4 117 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 HPS6Q86YV9 775 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 MYOCDQ8IZQ8 938 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 MTURNQ8N3F0 131 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-207ENST00000544052 OR1L4Q8NGR5 311 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 AKR7LQ8NHP1 331 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 RBM14Q96PK6 669 aaKnown RBP2.8□□□□□ -1.96
SCFD1-207ENST00000544052 TGS1Q96RS0 853 aaKnown RBP2.8□□□□□ -1.96
SCFD1-207ENST00000544052 TBX15Q96SF7 602 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 NIPSNAP3BQ9BS92 247 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 TUBGCP2Q9BSJ2 902 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 NAT10Q9H0A0 1025 aaKnown RBP2.8□□□□□ -1.96
SCFD1-207ENST00000544052 UBE2ZQ9H832 354 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-207ENST00000544052 DPM3Q9P2X0 92 aa2.8□□□□□ -1.96
SCFD1-207ENST00000544052 LRRK1Q38SD2 2015 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 NID2Q14112 1375 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 ADGRA3Q8IWK6 1321 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 IGKV6D-21A0A0A0MT36 114 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 A0A1B0GUS0 222 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 POLR2DO15514 142 aaKnown RBP2.79□□□□□ -1.96
SCFD1-207ENST00000544052 CXCL13O43927 109 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 OR10H3O60404 316 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 ATP5LO75964 103 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 OR8U8P0C7N1 319 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 HSMCR30P0CW71 290 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 CD52P31358 61 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 GCKP35557 465 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 GSG1Q2KHT4 349 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 CFAP221Q4G0U5 840 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 RNLSQ5VYX0 342 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 C16orf87Q6PH81 154 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 VITQ6UXI7 678 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 VN1R2Q8NFZ6 395 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 OR56B2PQ8NGI1 322 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 OR2A12Q8NGT7 310 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 BRSK1Q8TDC3 778 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 DNAJB3Q8WWF6 145 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 SLC25A38Q96DW6 304 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 SLC35A5Q9BS91 424 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 RNF126Q9BV68 326 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 PARD6BQ9BYG5 372 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 SGK2Q9HBY8 427 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 MCCC2Q9HCC0 563 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 NMRK1Q9NWW6 199 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 OR1A1Q9P1Q5 309 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 SEC14L3Q9UDX4 400 aa2.79□□□□□ -1.96
SCFD1-207ENST00000544052 PATJQ8NI35 1801 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms