RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 GSK3AP49840 483 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 GCNT2Q8N0V5 402 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 SFT2D1Q8WV19 159 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 DTD2Q96FN9 168 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 CALHM2Q9HA72 323 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 EFSO43281 561 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 ITGB7P26010 798 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 GRB2P62993 217 aaKnown RBP14.32□□□□□ -0.12
CHD4-210ENST00000544040 HTRA4P83105 476 aaPredicted RBP14.32□□□□□ -0.12
CHD4-210ENST00000544040 ZNF92Q03936 586 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 LMAN1LQ9HAT1 526 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 CHST11Q9NPF2 352 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 PRAMEF26H0Y7S4 382 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 CTRB1P17538 263 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 CTRB2Q6GPI1 263 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 MDGA2Q7Z553 956 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 MARC2Q969Z3 335 aa14.32□□□□□ -0.12
CHD4-210ENST00000544040 NME2P1O60361 137 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 EIF4EP06730 217 aaKnown RBP14.31□□□□□ -0.12
CHD4-210ENST00000544040 GSTP1P09211 210 aaKnown RBP14.31□□□□□ -0.12
CHD4-210ENST00000544040 FLI1Q01543 452 aaPredicted RBP14.31□□□□□ -0.12
CHD4-210ENST00000544040 ADAM5Q6NVV9 412 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 CBARPQ8N350 705 aaPredicted RBP14.31□□□□□ -0.12
CHD4-210ENST00000544040 NANPQ8TBE9 248 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 FAM122AQ96E09 287 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 TOE1Q96GM8 510 aaKnown RBP14.31□□□□□ -0.12
CHD4-210ENST00000544040 PRR14Q9BWN1 585 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 TAF9BQ9HBM6 251 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 EXOSC3Q9NQT5 275 aaKnown RBP14.31□□□□□ -0.12
CHD4-210ENST00000544040 MYO10Q9HD67 2058 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 ZNF264O43296 627 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 CYTIPO60759 359 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 ZDHHC11BP0C7U3 371 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 TPMTP51580 245 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 EDDM3BP56851 147 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 SF3B4Q15427 424 aaKnown RBP eCLIP14.31□□□□□ -0.122e-7■■■□□ 18.9
CHD4-210ENST00000544040 CMTM2Q8TAZ6 248 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 SLC38A5Q8WUX1 472 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 DEFA4P12838 97 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 BIDP55957 195 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 CLLU1OSQ5K130 101 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 NSG1A0A0A6YYJ2 146 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 SELENOFO60613 162 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 GCAP28676 217 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 TMEM64Q6YI46 380 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 DBX2Q6ZNG2 339 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 PSD2Q9BQI7 771 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 CPPED1Q9BRF8 314 aaPredicted RBP14.31□□□□□ -0.12
CHD4-210ENST00000544040 VPS25Q9BRG1 176 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 EXO1Q9UQ84 846 aaKnown RBP14.31□□□□□ -0.12
CHD4-210ENST00000544040 MYH6P13533 1939 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 CPT2P23786 658 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 RACK1P63244 317 aaKnown RBP14.31□□□□□ -0.12
CHD4-210ENST00000544040 CREB3L2Q70SY1 520 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 OLIG3Q7RTU3 272 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 KCNRGQ8N5I3 272 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 TMEM104Q8NE00 496 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 KCNJ15Q99712 375 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 IL23AQ9NPF7 189 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 CLEC2DQ9UHP7 191 aa14.31□□□□□ -0.12
CHD4-210ENST00000544040 DDAH2O95865 285 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 TMEM31Q5JXX7 168 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 COX20Q5RI15 118 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 PXDC1Q5TGL8 231 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 GRAMD2AQ8IUY3 354 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 NECTIN4Q96NY8 510 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 NOSIPQ9Y314 301 aaKnown RBP14.3□□□□□ -0.12
CHD4-210ENST00000544040 SULT1C4O75897 302 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 EDDM3AQ14507 147 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 SCCPDHQ8NBX0 429 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 OR10Z1Q8NGY1 313 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 OR2G3Q8NGZ4 309 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 NKX6-2Q9C056 277 aaPredicted RBP14.3□□□□□ -0.12
CHD4-210ENST00000544040 WDR76Q9H967 626 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 CLCF1Q9UBD9 225 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 LRIT2A6NDA9 550 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 PAX6P26367 422 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 SOWAHCQ53LP3 525 aaPredicted RBP14.3□□□□□ -0.12
CHD4-210ENST00000544040 GLYATL3Q5SZD4 288 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 KCTD11Q693B1 232 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 MBOAT2Q6ZWT7 520 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 NIPSNAP1Q9BPW8 284 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 ZNF230Q9UIE0 474 aaPredicted RBP14.3□□□□□ -0.12
CHD4-210ENST00000544040 SERTM2A0A1B0GWG4 89 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 FZD9O00144 591 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 ANGPTL7O43827 346 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 ZFAND5O76080 213 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 MTNR1BP49286 362 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 TRA2BP62995 288 aaKnown RBP14.3□□□□□ -0.12
CHD4-210ENST00000544040 ZNF750Q32MQ0 723 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 ABHD6Q9BV23 337 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 GOLGA4Q13439 2230 aaKnown RBP14.3□□□□□ -0.12
CHD4-210ENST00000544040 GPR75O95800 540 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 HPNP05981 417 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 NFYBP25208 207 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 SLC6A11P48066 632 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 Q499Y3 187 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 HIST2H3AQ71DI3 136 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 LRRC56Q8IYG6 542 aaPredicted RBP14.3□□□□□ -0.12
CHD4-210ENST00000544040 ARFGAP1Q8N6T3 406 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms