RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 OR2T7P0C7T2 308 aa17.84■□□□□ 0.45
COPS7A-218ENST00000543939 CEACAM1P13688 526 aa17.84■□□□□ 0.45
COPS7A-218ENST00000543939 GTF2E2P29084 291 aaKnown RBP17.84■□□□□ 0.45
COPS7A-218ENST00000543939 PYCR1P32322 319 aa17.84■□□□□ 0.45
COPS7A-218ENST00000543939 ACVR1BP36896 505 aa17.84■□□□□ 0.45
COPS7A-218ENST00000543939 CYB561P49447 251 aa17.84■□□□□ 0.45
COPS7A-218ENST00000543939 LCN6P62502 163 aa17.84■□□□□ 0.45
COPS7A-218ENST00000543939 TUBA1BP68363 451 aa17.84■□□□□ 0.45
COPS7A-218ENST00000543939 BDH1Q02338 343 aa17.84■□□□□ 0.45
COPS7A-218ENST00000543939 TUBA1AQ71U36 451 aa17.84■□□□□ 0.45
COPS7A-218ENST00000543939 KBTBD8Q8NFY9 601 aa17.84■□□□□ 0.45
COPS7A-218ENST00000543939 OR2T27Q8NH04 317 aa17.84■□□□□ 0.45
COPS7A-218ENST00000543939 UBL7Q96S82 380 aaPredicted RBP17.84■□□□□ 0.45
COPS7A-218ENST00000543939 STMN3Q9NZ72 180 aa17.84■□□□□ 0.45
COPS7A-218ENST00000543939 PCDHGB7Q9Y5F8 929 aa17.84■□□□□ 0.45
COPS7A-218ENST00000543939 NOX1Q9Y5S8 564 aa17.84■□□□□ 0.45
COPS7A-218ENST00000543939 MUC6Q6W4X9 2439 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 ALPK2Q86TB3 2170 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 A0A0G2JMM0 328 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 A0A1W2PPB8 328 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 A0A1W2PRS3 328 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 KIR3DP1A8MWS1 328 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 DCTN6O00399 190 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 XKRYO14609 159 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 ARHGEF9O43307 516 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 ZIC3O60481 467 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 CBR3O75828 277 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 NAA10P41227 235 aaPredicted RBP17.83■□□□□ 0.44
COPS7A-218ENST00000543939 DNASE1L1P49184 302 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 AIMP2Q13155 320 aaKnown RBP17.83■□□□□ 0.44
COPS7A-218ENST00000543939 DGUOKQ16854 277 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 IGF2-ASQ6U949 168 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 KLBQ86Z14 1044 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 SLC35F2Q8IXU6 374 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 OR6K6Q8NGW6 343 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 OR2T4Q8NH00 348 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 ADAMTS14Q8WXS8 1223 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 JSRP1Q96MG2 331 aaPredicted RBP17.83■□□□□ 0.44
COPS7A-218ENST00000543939 TMEM185BQ9H7F4 350 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 FANCFQ9NPI8 374 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 BABAM2Q9NXR7 383 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 TEKT2Q9UIF3 430 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 B3GALT5Q9Y2C3 310 aa17.83■□□□□ 0.44
COPS7A-218ENST00000543939 A0A1W2PRG6 482 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 FAM171A2A8MVW0 826 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 SELENOFO60613 162 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 HLA-DOBP13765 273 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 SHC1P29353 583 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 HCCSP53701 268 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 TLE3Q04726 772 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 C19orf57Q0VDD7 668 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 TGIF1Q15583 401 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 EEF1A1P5Q5VTE0 462 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 LYPD4Q6UWN0 246 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 SSX6Q7RTT6 188 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 OR6V1Q8N148 313 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 KDM8Q8N371 416 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 ZFP41Q8N8Y5 198 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 ZNF248Q8NDW4 579 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 KIAA1143Q96AT1 154 aaPredicted RBP17.82■□□□□ 0.44
COPS7A-218ENST00000543939 TRMT61AQ96FX7 289 aaKnown RBP17.82■□□□□ 0.44
COPS7A-218ENST00000543939 SRA1Q9HD15 236 aaKnown RBP17.82■□□□□ 0.44
COPS7A-218ENST00000543939 DKKL1Q9UK85 242 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 RPH3AQ9Y2J0 694 aaPredicted RBP17.82■□□□□ 0.44
COPS7A-218ENST00000543939 PMF1-BGLAPU3KQ54 211 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 FREM3P0C091 2139 aa17.82■□□□□ 0.44
COPS7A-218ENST00000543939 PNMA8CA0A1B0GUJ8 204 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 PRSS37A4D1T9 235 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 NPIPB13A6NJU9 1138 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 NPIPB4C9JG80 1138 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 AKR7A3O95154 331 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 MT-ND5P03915 603 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 OPN1LWP04000 364 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 RPS25P62851 125 aaKnown RBP17.81■□□□□ 0.44
COPS7A-218ENST00000543939 ABHD17BQ5VST6 288 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 PM20D2Q8IYS1 436 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 RFLNBQ8N5W9 214 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 ADPRHL1Q8NDY3 354 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 FER1L6-AS2Q96M78 137 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 OR5B2Q96R09 309 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 SLIRPQ9GZT3 109 aaKnown RBP17.81■□□□□ 0.44
COPS7A-218ENST00000543939 SYT4Q9H2B2 425 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 EXOSC4Q9NPD3 245 aaKnown RBP17.81■□□□□ 0.44
COPS7A-218ENST00000543939 VSX1Q9NZR4 365 aaPredicted RBP17.81■□□□□ 0.44
COPS7A-218ENST00000543939 ZMIZ1Q9ULJ6 1067 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 SSR3Q9UNL2 185 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 HDGFL3Q9Y3E1 203 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 MED13Q9UHV7 2174 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 NCKAP5O14513 1909 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 ZNF292O60281 2723 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 PROB1E7EW31 1015 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 ITGA3P26006 1051 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 GABRA5P31644 462 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 SERPINB10P48595 397 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 NOVA1P51513 510 aaKnown RBP17.81■□□□□ 0.44
COPS7A-218ENST00000543939 OC90Q02509 493 aaPredicted RBP17.81■□□□□ 0.44
COPS7A-218ENST00000543939 TMEM176BQ3YBM2 270 aaPredicted RBP17.81■□□□□ 0.44
COPS7A-218ENST00000543939 ZBTB46Q86UZ6 589 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 ZNF511Q8NB15 262 aa17.81■□□□□ 0.44
COPS7A-218ENST00000543939 DACH2Q96NX9 599 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms