RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 IL20RAQ9UHF4 553 aa5.6□□□□□ -1.51
LTBR-212ENST00000543542 PRSS50Q9UI38 385 aa5.6□□□□□ -1.51
LTBR-212ENST00000543542 FOXD3Q9UJU5 478 aaPredicted RBP5.6□□□□□ -1.51
LTBR-212ENST00000543542 ING1Q9UK53 422 aaPredicted RBP5.6□□□□□ -1.51
LTBR-212ENST00000543542 MGAT4BQ9UQ53 548 aa5.6□□□□□ -1.51
LTBR-212ENST00000543542 KLF2Q9Y5W3 355 aaPredicted RBP5.6□□□□□ -1.51
LTBR-212ENST00000543542 NCOA6Q14686 2063 aaPredicted RBP5.6□□□□□ -1.51
LTBR-212ENST00000543542 LOC102725191A0A1B0GVB3 256 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 CLEC18AA5D8T8 446 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 OR6C65A6NJZ3 312 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 ZNF587BE7ETH6 402 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 H0YHG0 523 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 C16orf97H3BN30 126 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 H3BN98 237 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 M0R3G1 203 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 CDC42EP2O14613 210 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 CASKO14936 926 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 TRAF3IP2O43734 574 aaPredicted RBP5.59□□□□□ -1.51
LTBR-212ENST00000543542 ENTPD5O75356 428 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 LYZL6O75951 148 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 CLDN1O95832 211 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 CGAP01215 116 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 GASTP01350 101 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 IGHG1P01857 330 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 ANXA8P13928 327 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 COX6B1P14854 86 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 GSTM3P21266 225 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 FPR3P25089 353 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 NOS3P29474 1203 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 HOXC12P31275 282 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 SLC6A6P31641 620 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 ACVR1BP36896 505 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 CSNK1A1P48729 337 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 RPS6KA3P51812 740 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 HMGA2P52926 109 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 IST1P53990 364 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 ERVK-25P63136 954 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 FAM27E3Q08E93 113 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 TSPAN31Q12999 210 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 SNTB1Q13884 538 aaKnown RBP5.59□□□□□ -1.51
LTBR-212ENST00000543542 GUSBP1Q15486 140 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 STK11Q15831 433 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 ATP6AP1Q15904 470 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 TSPO2Q5TGU0 170 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 FBXW10Q5XX13 1052 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 ANKRD34AQ69YU3 496 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 SP5Q6BEB4 398 aaPredicted RBP5.59□□□□□ -1.51
LTBR-212ENST00000543542 RPL13AP3Q6NVV1 102 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 C1orf94Q6P1W5 598 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 PGBD2Q6P3X8 592 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 SMARCD3Q6STE5 483 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 KLHL24Q6TFL4 600 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 CLEC18BQ6UXF7 455 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 MEX3BQ6ZN04 569 aaKnown RBP5.59□□□□□ -1.51
LTBR-212ENST00000543542 Q6ZT83 130 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 ZER1Q7Z7L7 766 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 AMIGO2Q86SJ2 522 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 HIPK1Q86Z02 1210 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 ZIC4Q8N9L1 334 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 POMGNT2Q8NAT1 580 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 CLEC18CQ8NCF0 446 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 OR4C15Q8NGM1 316 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 OR5K1Q8NHB7 308 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 LIPHQ8WWY8 451 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 LRTOMTQ8WZ04 291 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 KISS1RQ969F8 398 aaPredicted RBP5.59□□□□□ -1.51
LTBR-212ENST00000543542 ZNF566Q969W8 418 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 TXNDC15Q96J42 360 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 ZNF570Q96NI8 536 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 ALKBH3Q96Q83 286 aaPredicted RBP5.59□□□□□ -1.51
LTBR-212ENST00000543542 OR2M2Q96R28 347 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 MED18Q9BUE0 208 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 KATNB1Q9BVA0 655 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 IFT27Q9BW83 186 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 ULBP2Q9BZM5 246 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 ENKD1Q9H0I2 346 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 DENND2DQ9H6A0 471 aaPredicted RBP5.59□□□□□ -1.51
LTBR-212ENST00000543542 TBC1D23Q9NUY8 699 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 ASB6Q9NWX5 421 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 VNN3Q9NY84 501 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 JKAMPQ9P055 326 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 B3GAT1Q9P2W7 334 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 STX18Q9P2W9 335 aaKnown RBP5.59□□□□□ -1.51
LTBR-212ENST00000543542 PLEKHB1Q9UF11 243 aaPredicted RBP5.59□□□□□ -1.51
LTBR-212ENST00000543542 ZNF346Q9UL40 294 aaKnown RBP5.59□□□□□ -1.51
LTBR-212ENST00000543542 RCE1Q9Y256 329 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 HIF3AQ9Y2N7 669 aa5.59□□□□□ -1.51
LTBR-212ENST00000543542 RELNP78509 3460 aa5.58□□□□□ -1.52
LTBR-212ENST00000543542 TUBAL3A6NHL2 446 aa5.58□□□□□ -1.52
LTBR-212ENST00000543542 A6NIZ1 184 aa5.58□□□□□ -1.52
LTBR-212ENST00000543542 SAC3D1A6NKF1 404 aa5.58□□□□□ -1.52
LTBR-212ENST00000543542 G3V2T6 193 aa5.58□□□□□ -1.52
LTBR-212ENST00000543542 C19orf84I3L1E1 186 aa5.58□□□□□ -1.52
LTBR-212ENST00000543542 SOCS2O14508 198 aa5.58□□□□□ -1.52
LTBR-212ENST00000543542 ARHGEF9O43307 516 aa5.58□□□□□ -1.52
LTBR-212ENST00000543542 FZD7O75084 574 aa5.58□□□□□ -1.52
LTBR-212ENST00000543542 UPK3AO75631 287 aa5.58□□□□□ -1.52
LTBR-212ENST00000543542 RAD51DO75771 328 aa5.58□□□□□ -1.52
LTBR-212ENST00000543542 CNOT4O95628 575 aaKnown RBP5.58□□□□□ -1.52
LTBR-212ENST00000543542 PPP1R3DO95685 299 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms