RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 PROK2Q9HC23 129 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 A4GALTQ9NPC4 353 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 ASF1BQ9NVP2 202 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 CLEC4AQ9UMR7 237 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 NPIPA1Q9UND3 350 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 L3MBTL1Q9Y468 752 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 WIF1Q9Y5W5 379 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 ABCA12Q86UK0 2595 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 LRRK2Q5S007 2527 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 C15orf38-AP3S2A0A0A6YYH1 394 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 A0A1W2PQD3 144 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 MBD3L5A6NJ08 208 aaPredicted RBP4.6□□□□□ -1.67
CLIP1-217ENST00000543205 F8WDY8 70 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 KIAA0513O60268 411 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 CBR3O75828 277 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 TRAPPC6AO75865 159 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 GLSO94925 669 aaPredicted RBP4.6□□□□□ -1.67
CLIP1-217ENST00000543205 S100A9P06702 114 aaKnown RBP4.6□□□□□ -1.67
CLIP1-217ENST00000543205 CHRM4P08173 479 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 TFPTP0C1Z6 253 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 PI3P19957 117 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 SLC6A2P23975 617 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 GDF1P27539 372 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 MNAT1P51948 309 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 PRRX1P54821 245 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 GAS1P54826 345 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 LIPEQ05469 1076 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 FUT5Q11128 374 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 SELPLGQ14242 412 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 SLC10A1Q14973 349 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 ZNF141Q15928 474 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 ZNF630Q2M218 657 aaPredicted RBP4.6□□□□□ -1.67
CLIP1-217ENST00000543205 KLHL26Q53HC5 615 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 RABL3Q5HYI8 236 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 PDZK1Q5T2W1 519 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 TIGD3Q6B0B8 471 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 OR5M10Q6IEU7 315 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 C16orf89Q6UX73 402 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 CLEC9AQ6UXN8 241 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 HACD2Q6Y1H2 254 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 FRRS1Q6ZNA5 592 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 OLIG3Q7RTU3 272 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 ARPINQ7Z6K5 226 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 SERPINA11Q86U17 422 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 PLCZ1Q86YW0 608 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 MISPQ8IVT2 679 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 FAM109AQ8N4B1 249 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 FITM2Q8N6M3 262 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 METTL25Q8N6Q8 603 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 WDSUB1Q8N9V3 476 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 GATSQ8NAP1 163 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 OR4K17Q8NGC6 315 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 OR10A6Q8NH74 314 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 AKR7LQ8NHP1 331 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 NR4A3Q92570 626 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 MIB2Q96AX9 1013 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 TMEM19Q96HH6 336 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 NSL1Q96IY1 281 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 HS6ST2Q96MM7 605 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 GNRHR2Q96P88 292 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 DEFB127Q9H1M4 99 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 IKZF5Q9H5V7 419 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 EXO5Q9H790 373 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 KAT8Q9H7Z6 458 aaKnown RBP4.6□□□□□ -1.67
CLIP1-217ENST00000543205 PTGES2Q9H7Z7 377 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 MTHFD2LQ9H903 347 aaPredicted RBP4.6□□□□□ -1.67
CLIP1-217ENST00000543205 DKKL1Q9UK85 242 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 ANGPT4Q9Y264 503 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 AP3M1Q9Y2T2 418 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 PMF1-BGLAPU3KQ54 211 aa4.6□□□□□ -1.67
CLIP1-217ENST00000543205 ANKRD17O75179 2603 aaKnown RBP4.59□□□□□ -1.67
CLIP1-217ENST00000543205 NUP214P35658 2090 aaPredicted RBP4.59□□□□□ -1.67
CLIP1-217ENST00000543205 CREBBPQ92793 2442 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 CFAP73A6NFT4 308 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 SERINC4A6NH21 518 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 LRRC3CA6NJW4 275 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 NPIPB9F8W1W9 429 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 FXYD1O00168 92 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 HCRTR2O43614 444 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 CDC40O60508 579 aaKnown RBP eCLIP4.59□□□□□ -1.67
CLIP1-217ENST00000543205 UGT2B17O75795 530 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 PDE9AO76083 593 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 CBX6O95503 412 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 DBIP07108 87 aaKnown RBP4.59□□□□□ -1.67
CLIP1-217ENST00000543205 RFPL3SP0C7P2 107 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 IL7RP16871 459 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 GCKP35557 465 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 MAGEA5P43359 124 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 MTNR1AP48039 350 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 ADORA2A-AS1P86434 159 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 CDK6Q00534 326 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 SRSF1Q07955 248 aaKnown RBP eCLIP4.59□□□□□ -1.67
CLIP1-217ENST00000543205 RBBP4Q09028 425 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 LARS2Q15031 903 aaKnown RBP4.59□□□□□ -1.67
CLIP1-217ENST00000543205 PRAMEF7Q5VXH5 474 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 ZNF324BQ6AW86 544 aaPredicted RBP4.59□□□□□ -1.67
CLIP1-217ENST00000543205 REEP3Q6NUK4 255 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 ZNF529Q6P280 563 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 GFRALQ6UXV0 394 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 APOOLQ6UXV4 268 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms