RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, human

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-223	ENST00000542552	SH3BGR	P55822	239 aa	Predicted RBP	13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	ADAM8	P78325	824 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	IL1RL1	Q01638	556 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	PHYHD1	Q5SRE7	291 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	KLHL17	Q6TDP4	642 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	TGIF2LY	Q8IUE0	185 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	C20orf196	Q8IYI0	205 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	LRRC75A-AS1	Q8N1F1	130 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	KBTBD8	Q8NFY9	601 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	PFN4	Q8NHR9	129 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	TMEM239	Q8WW34	195 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	GEMIN6	Q8WXD5	167 aa	Known RBP	13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	NEUROG1	Q92886	237 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	ZNF837	Q96EG3	531 aa	Predicted RBP	13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	RADIL	Q96JH8	1075 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	PRRC1	Q96M27	445 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	HS6ST2	Q96MM7	605 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	EMC6	Q9BV81	110 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	OBP2B	Q9NPH6	170 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	MAN2C1	Q9NTJ4	1040 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	MED29	Q9NX70	200 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	TAGLN3	Q9UI15	199 aa		13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.52	□□□□□ -0.25
ECHDC2-223	ENST00000542552	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	ABCD4	O14678	606 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	FFAR1	O14842	300 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	PRSS23	O95084	383 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	ZNF682	O95780	498 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	IFNW1	P05000	195 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	DANCR	P0C864	163 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	HOXB1	P14653	301 aa	Predicted RBP	13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	NCK1	P16333	377 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	CDH2	P19022	906 aa	Predicted RBP	13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	AHCY	P23526	432 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	PRPS1	P60891	318 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	ARF1	P84077	181 aa	Known RBP	13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	ST3GAL3	Q11203	375 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	TBRG1	Q3YBR2	411 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	IFI44L	Q53G44	452 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	HMBOX1	Q6NT76	420 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	ANKRD16	Q6P6B7	361 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	TSEN54	Q7Z6J9	526 aa	Known RBP	13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	OFCC1	Q8IZS5	231 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	GPR137C	Q8N3F9	429 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	FBXW5	Q969U6	566 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	HSH2D	Q96JZ2	352 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	TMUB1	Q9BVT8	246 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	CRLF2	Q9HC73	371 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	C20orf141	Q9NUB4	165 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	ADA2	Q9NZK5	511 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	MGAT4B	Q9UQ53	548 aa		13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	HEATR1	Q9H583	2144 aa	Known RBP	13.51	□□□□□ -0.25
ECHDC2-223	ENST00000542552	HTR3E	A5X5Y0	456 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	C11orf98	E9PRG8	122 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	SMPD2	O60906	423 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	OR7A10	O76100	309 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	OR6A2	O95222	327 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	FAM107A	O95990	144 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	WNT11	O96014	354 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	HIST1H2AB	P04908	130 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	HSD17B1	P14061	328 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	IFNGR1	P15260	489 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	PAX7	P23759	505 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	NKX6-1	P78426	367 aa	Predicted RBP	13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	KRT72	Q14CN4	511 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	CEACAM16	Q2WEN9	425 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	GLYAT	Q6IB77	296 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	HIST3H2A	Q7L7L0	130 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	PGAM4	Q8N0Y7	254 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	FITM2	Q8N6M3	262 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	OR6X1	Q8NH79	312 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	SMAP2	Q8WU79	429 aa	Predicted RBP	13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	HIST1H2AC	Q93077	130 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	SGTB	Q96EQ0	304 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	C1QTNF6	Q9BXI9	259 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	GSX2	Q9BZM3	304 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	GORASP2	Q9H8Y8	452 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	DCAF13	Q9NV06	445 aa	Known RBP	13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	ZNF701	Q9NV72	531 aa	Predicted RBP	13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	CD300A	Q9UGN4	299 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	EGFL7	Q9UHF1	273 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	MED31	Q9Y3C7	131 aa		13.5	□□□□□ -0.25
ECHDC2-223	ENST00000542552	ZNF726	A6NNF4	738 aa		13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552	ZNF99	A8MXY4	864 aa	Predicted RBP	13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552		J3KTA2	159 aa		13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552		M0R1B8	84 aa		13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552		M0R3G1	203 aa		13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552	OVOL3	O00110	214 aa		13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552	SOD3	P08294	240 aa		13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552	FUT1	P19526	365 aa		13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552	YAP1	P46937	504 aa	Known RBP	13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552	LSM11	P83369	360 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552	SPOCK1	Q08629	439 aa		13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552	CAMK2D	Q13557	499 aa		13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552	PGGHG	Q32M88	737 aa		13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552	C3orf36	Q3SXR2	165 aa		13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552	SHE	Q5VZ18	495 aa		13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552	CARD17	Q5XLA6	110 aa		13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552	KLHL24	Q6TFL4	600 aa		13.49	□□□□□ -0.25
ECHDC2-223	ENST00000542552	SLC35D2	Q76EJ3	337 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms