RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 SGK494L7N484 410 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 PGRMC2O15173 223 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 TLX2O43763 284 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 SELENOFO60613 162 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 ELK1P19419 428 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 SDHAP31040 664 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 PCBP4P57723 403 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 GAGE1Q13065 139 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 SLAQ13239 276 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 TDGQ13569 410 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 TRA2AQ13595 282 aaKnown RBP eCLIP7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 ZNF311Q5JNZ3 666 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 CD276Q5ZPR3 534 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 SHFQ7M4L6 423 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 RD3Q7Z3Z2 195 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 S100A7AQ86SG5 101 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 PAQR7Q86WK9 346 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 IQCF1Q8N6M8 205 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 FRMD1Q8N878 549 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 PROKR2Q8NFJ6 384 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 DMBX1Q8NFW5 382 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 NEK7Q8TDX7 302 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 RGMAQ96B86 450 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 MS4A6EQ96DS6 147 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 LRRC46Q96FV0 321 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 SCMH1Q96GD3 660 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 SLC38A2Q96QD8 506 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 ATF6BQ99941 703 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 SLC35A5Q9BS91 424 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 PRR14Q9BWN1 585 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 DPAGT1Q9H3H5 408 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 TCEAL2Q9H3H9 227 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 WSB2Q9NYS7 404 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 SCP2D1Q9UJQ7 156 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 ACSL6Q9UKU0 697 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 CYP8B1Q9UNU6 501 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 CORO2BQ9UQ03 480 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 MRPS2Q9Y399 296 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 RPL36Q9Y3U8 105 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 HEATR5BQ9P2D3 2071 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 C5orf51A6NDU8 294 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 CD8B2A6NJW9 211 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 ALG1L2C9J202 215 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 PRAMEF26H0Y7S4 382 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 OIP5O43482 229 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 PRKYO43930 277 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 B4GALT2O60909 372 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 AKR7A3O95154 331 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 TCRBP04435 133 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 CD8BP10966 210 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 F3P13726 295 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 NDUFS1P28331 727 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 CAMLGP49069 296 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 SELENOPP49908 381 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 SNRPNP63162 240 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 KRT33BQ14525 404 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 OR8G1Q15617 311 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 ST3GAL2Q16842 350 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 NHLRC3Q5JS37 347 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 OR4C11Q6IEV9 310 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 RGS7BPQ6MZT1 257 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 MTFR2Q6P444 385 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 FAM198BQ6UWH4 519 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 PGAP1Q75T13 922 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 MARCH9Q86YJ5 346 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 MFSD9Q8NBP5 474 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 STOML3Q8TAV4 291 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 ZNF596Q8TC21 504 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 OIT3Q8WWZ8 545 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 CCDC74AQ96AQ1 378 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 PACRGQ96M98 296 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 AMDHD1Q96NU7 426 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 DNTTIP1Q9H147 329 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 CXorf36Q9H7Y0 433 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 C1GALT1Q9NS00 363 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 SIRT3Q9NTG7 399 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 PTTG3PQ9NZH4 202 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 IL20RAQ9UHF4 553 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 FANCMQ8IYD8 2048 aa7.33□□□□□ -1.24
PDLIM5-221ENST00000542407 A0A1W2PPH5 198 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 ZAR1LA6NP61 321 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 UBE2CO00762 179 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 ATXN7O15265 892 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 NUDT21O43809 227 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 TSPAN2O60636 221 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 STATHP02808 62 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 IFNA6P05013 189 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 SERPINA5P05154 406 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 CELA2BP08218 269 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 NMBP08949 121 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 CTXN2P0C2S0 81 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 NR2F6P10588 404 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 ETFAP13804 333 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 IFNGR1P15260 489 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 PAX6P26367 422 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 SELENOWP63302 87 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 SERTAD2Q14140 314 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 IFI44LQ53G44 452 aa7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 PTCRAQ6ISU1 281 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-221ENST00000542407 TMEM88Q6PEY1 159 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms