RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 WDR74Q6RFH5 385 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-218ENST00000541615 CD300LDQ6UXZ3 194 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 FCRLAQ7L513 359 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 LRRC70Q7Z2Q7 622 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 MRPL21Q7Z2W9 205 aaKnown RBP4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ADCK2Q7Z695 626 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ZNF546Q86UE3 836 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 LRRTM1Q86UE6 522 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 TMEM183AQ8IXX5 376 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 OR4N4Q8N0Y3 316 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 HORMAD2Q8N7B1 307 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 OR2T12Q8NG77 320 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 OR11H1Q8NG94 326 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 OR4S1Q8NGB4 309 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 OR1S2Q8NGQ3 325 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 OR9I1Q8NGQ6 314 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 OR1J2Q8NGS2 313 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 OR13C4Q8NGS5 318 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 OR11H2Q8NH07 326 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 LMO3Q8TAP4 145 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 STT3BQ8TCJ2 826 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 SLC7A13Q8TCU3 470 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 THAP3Q8WTV1 239 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-218ENST00000541615 NUDCD2Q8WVJ2 157 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 RLN3Q8WXF3 142 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 HSD17B8Q92506 261 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 SPSB4Q96A44 273 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 TMEM18Q96B42 140 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 MVB12AQ96EY5 273 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ACY3Q96HD9 319 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 REEP6Q96HR9 211 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 PGAM5Q96HS1 289 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 PRRC1Q96M27 445 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 WDR92Q96MX6 357 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ZNF583Q96ND8 569 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 F2RL3Q96RI0 385 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ZNF587Q96SQ5 575 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-218ENST00000541615 COPS8Q99627 209 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 MS4A8Q9BY19 250 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ZNF350Q9GZX5 532 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 FXYD6Q9H0Q3 95 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 REEP1Q9H902 201 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 TMEM27Q9HBJ8 222 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 HHATLQ9HCP6 504 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 CUTCQ9NTM9 273 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 RNF19AQ9NV58 838 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 ASF1BQ9NVP2 202 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 SIDT1Q9NXL6 827 aaKnown RBP4.78□□□□□ -1.64
SNHG1-218ENST00000541615 COMMD9Q9P000 198 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 NTMQ9P121 344 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 CACFD1Q9UGQ2 172 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 SIX4Q9UIU6 781 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 KCNE5Q9UJ90 142 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 CDC42EP3Q9UKI2 254 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 IKZF2Q9UKS7 526 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 FBXO4Q9UKT5 387 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 CNTN6Q9UQ52 1028 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 NIP7Q9Y221 180 aaKnown RBP eCLIP4.78□□□□□ -1.644e-44■■■■■ 26.8
SNHG1-218ENST00000541615 MEMO1Q9Y316 297 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 OR10H1Q9Y4A9 318 aa4.78□□□□□ -1.64
SNHG1-218ENST00000541615 C3P01024 1663 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 ZNF638Q14966 1978 aaKnown RBP4.77□□□□□ -1.65
SNHG1-218ENST00000541615 FAM230AA0A1W2PPH8 454 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 A0A1W2PPV4 95 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 SLC22A31A6NKX4 558 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 IFITM10A6NMD0 228 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 YDJCA8MPS7 323 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 A8MVM7 634 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 ZNF593O00488 134 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-218ENST00000541615 CXCR6O00574 342 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 MSTNO14793 375 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 ARPC3O15145 178 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 DLX3O60479 287 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 TPST2O60704 377 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 CA11O75493 328 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 MMP23AO75900 390 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 OR2C1O95371 312 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 HLA-DPB1P04440 258 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 BCHEP06276 602 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 CHRM4P08173 479 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 TMEM225BP0DP42 221 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 MAPTP10636 758 aaKnown RBP4.77□□□□□ -1.65
SNHG1-218ENST00000541615 FABP4P15090 132 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 PNLIPP16233 465 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 RHOQP17081 205 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 RAB6AP20340 208 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 IDSP22304 550 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 NFYBP25208 207 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 ITPKBP27987 946 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 EPHA2P29317 976 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 IL12BP29460 328 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 GCH1P30793 250 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 SOX18P35713 384 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 AGTR2P50052 363 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 DAPP51397 102 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 ZNF84P51523 738 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 ZNF41P51814 821 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-218ENST00000541615 JAK3P52333 1124 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 CRISP1P54107 249 aa4.77□□□□□ -1.65
SNHG1-218ENST00000541615 TAS2R19P59542 299 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms