RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 ICE1Q9Y2F5 2266 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 PIP5K1CO60331 668 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 OR10H3O60404 316 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 FKBP6O75344 327 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 ZNF432O94892 652 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 BCL10O95999 233 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 FPR3P25089 353 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 OMPP47874 163 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 SH3BGRP55822 239 aaPredicted RBP16.6■□□□□ 0.25
VPS33A-205ENST00000541169 STK11Q15831 433 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 EXOC3L2Q2M3D2 409 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 ALG10Q5BKT4 473 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 RPL13AP3Q6NVV1 102 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 C1orf94Q6P1W5 598 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 NIPAL3Q6P499 406 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 STAC2Q6ZMT1 411 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 SLC35D2Q76EJ3 337 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 KDM8Q8N371 416 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 C1orf162Q8NEQ5 155 aaPredicted RBP16.6■□□□□ 0.25
VPS33A-205ENST00000541169 FNDC8Q8TC99 324 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 KISS1RQ969F8 398 aaPredicted RBP16.6■□□□□ 0.25
VPS33A-205ENST00000541169 ARMC1Q9NVT9 282 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 DNAJB9Q9UBS3 223 aa16.6■□□□□ 0.25
VPS33A-205ENST00000541169 SAMHD1Q9Y3Z3 626 aaKnown RBP16.6■□□□□ 0.25
VPS33A-205ENST00000541169 ARRDC5A6NEK1 342 aa16.59■□□□□ 0.25
VPS33A-205ENST00000541169 ZNF587BE7ETH6 402 aa16.59■□□□□ 0.25
VPS33A-205ENST00000541169 C11orf98E9PRG8 122 aa16.59■□□□□ 0.25
VPS33A-205ENST00000541169 ENTPD5O75356 428 aa16.59■□□□□ 0.25
VPS33A-205ENST00000541169 DEAF1O75398 565 aaPredicted RBP16.59■□□□□ 0.25
VPS33A-205ENST00000541169 CCNB2O95067 398 aa16.59■□□□□ 0.25
VPS33A-205ENST00000541169 HPRP00739 348 aa16.59■□□□□ 0.25
VPS33A-205ENST00000541169 ADAP00813 363 aa16.59■□□□□ 0.25
VPS33A-205ENST00000541169 COX5AP20674 150 aa16.59■□□□□ 0.25
VPS33A-205ENST00000541169 MAKP20794 623 aa16.59■□□□□ 0.25
VPS33A-205ENST00000541169 IL32P24001 234 aa16.59■□□□□ 0.25
VPS33A-205ENST00000541169 GRNP28799 593 aaKnown RBP16.59■□□□□ 0.25
VPS33A-205ENST00000541169 FAM27E3Q08E93 113 aa16.59■□□□□ 0.25
VPS33A-205ENST00000541169 NHLRC1Q6VVB1 395 aa16.59■□□□□ 0.25
VPS33A-205ENST00000541169 GNPDA2Q8TDQ7 276 aa16.59■□□□□ 0.25
VPS33A-205ENST00000541169 BOD1Q96IK1 185 aa16.59■□□□□ 0.25
VPS33A-205ENST00000541169 ZNF226Q9NYT6 803 aa16.59■□□□□ 0.25
VPS33A-205ENST00000541169 RPL36A-HNRNPH2H7BZ11 118 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 C19orf84I3L1E1 186 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 IFNGR1P15260 489 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 GSTM3P21266 225 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 MPGP29372 298 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 DNAJA1P31689 397 aaKnown RBP16.58■□□□□ 0.24
VPS33A-205ENST00000541169 NTF4P34130 210 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 AQP2P41181 271 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 GPR4P46093 362 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 ACTR3P61158 418 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 SEC23BQ15437 767 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 MICAQ29983 383 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 ZFP1Q6P2D0 407 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 CXorf67Q86X51 503 aaPredicted RBP16.58■□□□□ 0.24
VPS33A-205ENST00000541169 GPR137CQ8N3F9 429 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 C17orf78Q8N4C9 275 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 OR4C15Q8NGM1 316 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 HSD17B8Q92506 261 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 NRBF2Q96F24 287 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 SLC25A44Q96H78 314 aaPredicted RBP16.58■□□□□ 0.24
VPS33A-205ENST00000541169 FAM46AQ96IP4 442 aaKnown RBP16.58■□□□□ 0.24
VPS33A-205ENST00000541169 OR2M2Q96R28 347 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 TXNIPQ9H3M7 391 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 MOV10Q9HCE1 1003 aaKnown RBP16.58■□□□□ 0.24
VPS33A-205ENST00000541169 PRSS50Q9UI38 385 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 AP4S1Q9Y587 144 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 COL12A1Q99715 3063 aa16.58■□□□□ 0.24
VPS33A-205ENST00000541169 SLC35F4A4IF30 521 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 UNC119BA6NIH7 251 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 A6NIZ1 184 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 MCIDASD6RGH6 385 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 CASKO14936 926 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 CLOCKO15516 846 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 KLF4O43474 513 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 NDUFB2O95178 105 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 IGHMP01871 453 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 EPXP11678 715 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 HLA-DOBP13765 273 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 FUT4P22083 530 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 SELENOPP49908 381 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 RAP1BP61224 184 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 RAP1AP62834 184 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 FAPQ12884 760 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 TSPAN31Q12999 210 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 TSPO2Q5TGU0 170 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 HMBOX1Q6NT76 420 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 TMEM123Q8N131 208 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 OR51A7Q8NH64 312 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 ZNF566Q969W8 418 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 MED18Q9BUE0 208 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 BDH2Q9BUT1 245 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 MCCC2Q9HCC0 563 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 NGBQ9NPG2 151 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 SLC7A10Q9NS82 523 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 MGAT4BQ9UQ53 548 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 SIGLEC7Q9Y286 467 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 PTPN13Q12923 2485 aa16.57■□□□□ 0.24
VPS33A-205ENST00000541169 SH3D21A4FU49 640 aa16.56■□□□□ 0.24
VPS33A-205ENST00000541169 PDLIM1O00151 329 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms