RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 TMEM225Q6GV28 225 aa12.53□□□□□ -0.4
LTBR-209ENST00000541102 TTC33Q6PID6 262 aaPredicted RBP12.53□□□□□ -0.4
LTBR-209ENST00000541102 PIWIL3Q7Z3Z3 882 aaKnown RBP12.53□□□□□ -0.4
LTBR-209ENST00000541102 GPAT4Q86UL3 456 aa12.53□□□□□ -0.4
LTBR-209ENST00000541102 ZNF417Q8TAU3 575 aa12.53□□□□□ -0.4
LTBR-209ENST00000541102 SLC7A13Q8TCU3 470 aa12.53□□□□□ -0.4
LTBR-209ENST00000541102 MUCL1Q96DR8 90 aa12.53□□□□□ -0.4
LTBR-209ENST00000541102 ZNF587Q96SQ5 575 aaPredicted RBP12.53□□□□□ -0.4
LTBR-209ENST00000541102 MMADHCQ9H3L0 296 aaPredicted RBP12.53□□□□□ -0.4
LTBR-209ENST00000541102 ESRP2Q9H6T0 727 aaKnown RBP12.53□□□□□ -0.4
LTBR-209ENST00000541102 MAGIXQ9H6Y5 334 aa12.53□□□□□ -0.4
LTBR-209ENST00000541102 PARPBPQ9NWS1 579 aa12.53□□□□□ -0.4
LTBR-209ENST00000541102 ASB6Q9NWX5 421 aa12.53□□□□□ -0.4
LTBR-209ENST00000541102 UPB1Q9UBR1 384 aa12.53□□□□□ -0.4
LTBR-209ENST00000541102 AURKCQ9UQB9 309 aa12.53□□□□□ -0.4
LTBR-209ENST00000541102 FLVCR1Q9Y5Y0 555 aa12.53□□□□□ -0.4
LTBR-209ENST00000541102 CADP27708 2225 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 DHRS12A0PJE2 317 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 AQP7P3A6NL99 342 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 CNOT4O95628 575 aaKnown RBP12.52□□□□□ -0.41
LTBR-209ENST00000541102 CD3EP07766 207 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 COX5AP20674 150 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 MAKP20794 623 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 RRM2P31350 389 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 RBM34P42696 430 aaKnown RBP12.52□□□□□ -0.41
LTBR-209ENST00000541102 FOXG1P55316 489 aaPredicted RBP12.52□□□□□ -0.41
LTBR-209ENST00000541102 SPIBQ01892 262 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 CHRNB3Q05901 458 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 TRAM2Q15035 370 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 FAM98BQ52LJ0 330 aaKnown RBP12.52□□□□□ -0.41
LTBR-209ENST00000541102 NCMAPQ5T1S8 102 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 AAED1Q7RTV5 226 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 YTHDF3Q7Z739 585 aaKnown RBP12.52□□□□□ -0.41
LTBR-209ENST00000541102 CYP4Z1Q86W10 505 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 WDFY1Q8IWB7 410 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 NRMQ8IXM6 262 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 C10orf53Q8N6V4 93 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 OR9K2Q8NGE7 335 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 AKAP1Q92667 903 aaKnown RBP eCLIP12.52□□□□□ -0.412e-8■■■□□ 16.2
LTBR-209ENST00000541102 TMEM204Q9BSN7 226 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 CHID1Q9BWS9 393 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 TRIM15Q9C019 465 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 B3GAT1Q9P2W7 334 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 FAM32AQ9Y421 112 aaKnown RBP12.52□□□□□ -0.41
LTBR-209ENST00000541102 RNF115Q9Y4L5 304 aa12.52□□□□□ -0.41
LTBR-209ENST00000541102 A0A1W2PR80 420 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 A0A1W2PRQ8 180 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 DPRXA6NFQ7 191 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 OR5H1A6NKK0 313 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 MS4A18H0YCH9 400 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 HS3ST1O14792 307 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 ARHGEF9O43307 516 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 RAP2AP10114 183 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 HLA-DOBP13765 273 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 HOXC12P31275 282 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 LIMS1P48059 325 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 BSPH1Q075Z2 132 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 FHL1Q13642 323 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 DGCR6Q14129 220 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 KPNB1Q14974 876 aaKnown RBP12.51□□□□□ -0.41
LTBR-209ENST00000541102 LAPTM4AQ15012 233 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 ZSCAN26Q16670 478 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 MS4A18Q3C1V0 323 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 FGD3Q5JSP0 725 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 TIMM23BQ5SRD1 257 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 TSPO2Q5TGU0 170 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 ZIC4Q8N9L1 334 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 OR4C15Q8NGM1 316 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 OR52N5Q8NH56 324 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 NEUROG1Q92886 237 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 PERPQ96FX8 193 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 ZNF385AQ96PM9 386 aaKnown RBP12.51□□□□□ -0.41
LTBR-209ENST00000541102 GPA33Q99795 319 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 SF3B5Q9BWJ5 86 aaKnown RBP12.51□□□□□ -0.41
LTBR-209ENST00000541102 SLC19A3Q9BZV2 496 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 SLC7A10Q9NS82 523 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 USF3Q68DE3 2245 aa12.51□□□□□ -0.41
LTBR-209ENST00000541102 ALPK2Q86TB3 2170 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 SETD2Q9BYW2 2564 aaPredicted RBP12.5□□□□□ -0.41
LTBR-209ENST00000541102 SH3PXD2BA1X283 911 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 PLPP3O14495 311 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 CDC42EP2O14613 210 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 OR7A10O76100 309 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 GADD45GO95257 159 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 STAMBPO95630 424 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 ASAH2BP0C7U1 165 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 IFI30P13284 250 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 ITGA2P17301 1181 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 GTF2E2P29084 291 aaKnown RBP12.5□□□□□ -0.41
LTBR-209ENST00000541102 ZNF83P51522 516 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 Q5PR19 223 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 SHEQ5VZ18 495 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 C5orf46Q6UWT4 87 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 SEZ6L2Q6UXD5 910 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 NHLRC1Q6VVB1 395 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 ZNF730Q6ZMV8 503 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 MBOAT2Q6ZWT7 520 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 TMEM179BQ7Z7N9 219 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 P2RY8Q86VZ1 359 aa12.5□□□□□ -0.41
LTBR-209ENST00000541102 ZNF611Q8N823 705 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms