RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 RPL4P36578 427 aaKnown RBP7.54□□□□□ -1.2
CHD4-208ENST00000540960 APOBEC1P41238 236 aaKnown RBP7.54□□□□□ -1.2
CHD4-208ENST00000540960 EIF1P41567 113 aaKnown RBP7.54□□□□□ -1.2
CHD4-208ENST00000540960 TAS2R43P59537 309 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 HOXC5Q00444 222 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 ZNF91Q05481 1191 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 KRTAP1-1Q07627 177 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 CRYZQ08257 329 aaKnown RBP7.54□□□□□ -1.2
CHD4-208ENST00000540960 MLLT11Q13015 90 aaPredicted RBP7.54□□□□□ -1.2
CHD4-208ENST00000540960 MRPL28Q13084 256 aaKnown RBP7.54□□□□□ -1.2
CHD4-208ENST00000540960 GPR50Q13585 617 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 SPHARQ15513 63 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 TRAM1Q15629 374 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 SLC35D3Q5M8T2 416 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 TMEM236Q5W0B7 351 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 SLC30A6Q6NXT4 461 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 TMEM81Q6P7N7 255 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 KIRREL2Q6UWL6 708 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 ISLR2Q6UXK2 745 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 USP43Q70EL4 1123 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 NDUFAF7Q7L592 441 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 HDDC2Q7Z4H3 204 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 HMGN2P46Q86SG4 172 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 ZAR1Q86SH2 424 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 ATG4DQ86TL0 474 aaPredicted RBP7.54□□□□□ -1.2
CHD4-208ENST00000540960 LAPTM4BQ86VI4 370 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 CCDC103Q8IW40 242 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 C10orf53Q8N6V4 93 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 POMGNT2Q8NAT1 580 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 POGLUT1Q8NBL1 392 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 DOK4Q8TEW6 326 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 S100ZQ8WXG8 99 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 C12orf43Q96C57 262 aaKnown RBP7.54□□□□□ -1.2
CHD4-208ENST00000540960 RNFT2Q96EX2 444 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 SGCZQ96LD1 299 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 SAMD8Q96LT4 415 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 Q96MF0 132 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 GPX7Q96SL4 187 aaPredicted RBP7.54□□□□□ -1.2
CHD4-208ENST00000540960 MNTQ99583 582 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 SPSB2Q99619 263 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 WFDC6Q9BQY6 131 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 C19orf24Q9BVV8 132 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 FUNDC2Q9BWH2 189 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 RSPO3Q9BXY4 272 aaPredicted RBP7.54□□□□□ -1.2
CHD4-208ENST00000540960 ADAM19Q9H013 955 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 PTGES2Q9H7Z7 377 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 NANSQ9NR45 359 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 HAO2Q9NYQ3 351 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 FLRT3Q9NZU0 649 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 ABI3Q9P2A4 366 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 MYOTQ9UBF9 498 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 MOKQ9UQ07 419 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 SIGLEC7Q9Y286 467 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 DTX4Q9Y2E6 619 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 CARD8Q9Y2G2 431 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 YARS2Q9Y2Z4 477 aaKnown RBP7.54□□□□□ -1.2
CHD4-208ENST00000540960 PTRH2Q9Y3E5 179 aaKnown RBP7.54□□□□□ -1.2
CHD4-208ENST00000540960 CORINQ9Y5Q5 1042 aa7.54□□□□□ -1.2
CHD4-208ENST00000540960 NUP214P35658 2090 aaPredicted RBP7.54□□□□□ -1.2
CHD4-208ENST00000540960 MPDZO75970 2070 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 IGLV3-32A0A0A0MS00 114 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 NSG1A0A0A6YYJ2 146 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 A8MVM7 634 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 ZNF208O43345 1280 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 AKAP8O43823 692 aaKnown RBP7.53□□□□□ -1.2
CHD4-208ENST00000540960 AIREO43918 545 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 PRKYO43930 277 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 INMTO95050 263 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 OR6A2O95222 327 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 AHSA1O95433 338 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 IFNA2P01563 188 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 THY1P04216 161 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 SCG5P05408 212 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 FBXO45P0C2W1 286 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 CD36P16671 472 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 GALP22466 123 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 ADH6P28332 368 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 SOX6P35712 828 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 RBMXP38159 391 aaKnown RBP7.53□□□□□ -1.2
CHD4-208ENST00000540960 ZNF41P51814 821 aaPredicted RBP7.53□□□□□ -1.2
CHD4-208ENST00000540960 DLX5P56178 289 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 BDH1Q02338 343 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 HSF2Q03933 536 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 AIMP2Q13155 320 aaKnown RBP7.53□□□□□ -1.2
CHD4-208ENST00000540960 PON3Q15166 354 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 NNATQ16517 81 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 SMN1Q16637 294 aaKnown RBP7.53□□□□□ -1.2
CHD4-208ENST00000540960 ARMCX4Q5H9R4 360 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 CLEC12AQ5QGZ9 265 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 AADACL4Q5VUY2 407 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 SHEQ5VZ18 495 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 FAM205BPQ63HN1 556 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 ACSM5Q6NUN0 579 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 MEPCEQ7L2J0 689 aaKnown RBP7.53□□□□□ -1.2
CHD4-208ENST00000540960 ADCK1Q86TW2 530 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 KIF18BQ86Y91 864 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 DOLPP1Q86YN1 238 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 KLHL36Q8N4N3 616 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 ACBD7Q8N6N7 88 aa7.53□□□□□ -1.2
CHD4-208ENST00000540960 NANOGP1Q8N7R0 232 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms