RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 SERPINF1P36955 418 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 RBM34P42696 430 aaKnown RBP9.08□□□□□ -0.96
CDCA3-208ENST00000540683 P2RY4P51582 365 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 EFNA4P52798 201 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 CDH12P55289 794 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 HOXC5Q00444 222 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 TNK1Q13470 666 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 TAF11Q15544 211 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 ADRM1Q16186 407 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 VMACQ2NL98 169 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 REP15Q6BDI9 236 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 CCDC80Q76M96 950 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 NUP37Q8NFH4 326 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 OR5J2Q8NH18 312 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 FAM168AQ92567 244 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 BCL2L2Q92843 193 aaPredicted RBP9.08□□□□□ -0.96
CDCA3-208ENST00000540683 ARHGDIGQ99819 225 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 NDEL1Q9GZM8 345 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 RAB1BQ9H0U4 201 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 PCDHAC1Q9H158 963 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 C1orf198Q9H425 327 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 CRLF2Q9HC73 371 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 GPR35Q9HC97 309 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 ZNF229Q9UJW7 825 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 VPS13CQ709C8 3753 aa9.08□□□□□ -0.96
CDCA3-208ENST00000540683 A0A1W2PRG6 482 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 SLC22A23A1A5C7 686 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 SSX4O60224 188 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 UBL3O95164 117 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 RAB36O95755 333 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 IGKV3-15P01624 115 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 CD8AP01732 235 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 IGHV4-39P01824 125 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 ADORA3P0DMS8 318 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 HOXB4P17483 251 aaPredicted RBP9.07□□□□□ -0.96
CDCA3-208ENST00000540683 HTR2AP28223 471 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 NTF4P34130 210 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 GUCA1AP43080 201 aaPredicted RBP9.07□□□□□ -0.96
CDCA3-208ENST00000540683 CAPZA2P47755 286 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 MTPNP58546 118 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 SELENOVP59797 346 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 POU3F1Q03052 451 aaPredicted RBP9.07□□□□□ -0.96
CDCA3-208ENST00000540683 OCLNQ16625 522 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 HIKESHIQ53FT3 197 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 ENTPD8Q5MY95 495 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 UNQ6126/PRO20091Q6UXV3 157 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 ZNF627Q7L945 461 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 SLC46A3Q7Z3Q1 461 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 PIWIL3Q7Z3Z3 882 aaKnown RBP9.07□□□□□ -0.96
CDCA3-208ENST00000540683 SMYD1Q8NB12 490 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 OR10A6Q8NH74 314 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 FNDC8Q8TC99 324 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 ADAMTS16Q8TE57 1224 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 NEUROG1Q92886 237 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 LRRC58Q96CX6 371 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 OR2M2Q96R28 347 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 C1QTNF6Q9BXI9 259 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 TMEM120AQ9BXJ8 343 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 ULBP2Q9BZM5 246 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 ZNF385DQ9H6B1 395 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 ZNF442Q9H7R0 627 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 CA10Q9NS85 328 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 GPR160Q9UJ42 338 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 MOKQ9UQ07 419 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 CAPN7Q9Y6W3 813 aa9.07□□□□□ -0.96
CDCA3-208ENST00000540683 ZNF469Q96JG9 3925 aaPredicted RBP9.06□□□□□ -0.96
CDCA3-208ENST00000540683 A0A1W2PR80 420 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 RNF223E7ERA6 249 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 PLPP3O14495 311 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 MRASO14807 208 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 TPST1O60507 370 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 CCDC22O60826 627 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 UPK3AO75631 287 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 IGLV1-44P01699 117 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 UMPSP11172 480 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 ACVR1BP36896 505 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 CSNK1A1P48729 337 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 PPOXP50336 477 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 PDLIM4P50479 330 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 DAP3P51398 398 aaKnown RBP9.06□□□□□ -0.96
CDCA3-208ENST00000540683 TAS2R41P59536 307 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 ARF1P84077 181 aaKnown RBP9.06□□□□□ -0.96
CDCA3-208ENST00000540683 GALK2Q01415 458 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 NAAAQ02083 359 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 ZP4Q12836 540 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 EFNB3Q15768 340 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 DUSP7Q16829 419 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 GSG1Q2KHT4 349 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 CEACAM16Q2WEN9 425 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 NRN1LQ496H8 165 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 C11orf71Q6IPW1 123 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 NANOGP8Q6NSW7 305 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 NANOGNBQ7Z5D8 188 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 PTOV1Q86YD1 416 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 C20orf196Q8IYI0 205 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 OR6X1Q8NH79 312 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 NEU4Q8WWR8 484 aaPredicted RBP9.06□□□□□ -0.96
CDCA3-208ENST00000540683 ZNF566Q969W8 418 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 SLC25A44Q96H78 314 aaPredicted RBP9.06□□□□□ -0.96
CDCA3-208ENST00000540683 LRMDAQ9H2I8 198 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms