RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 A0A1B0GWA3 101 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 SH3PXD2BA1X283 911 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 B4DSR2 109 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 C5orf58C9J3I9 102 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 M0R233 179 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 CLIC1O00299 241 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 ADRA2AP08913 450 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 NUDT7P0C024 238 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 KITP10721 976 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 GLRXP35754 106 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 CAPZA2P47755 286 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 POLR2JP52435 117 aaKnown RBP10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 WDR4P57081 412 aaKnown RBP10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 IL1RL1Q01638 556 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 TRIP10Q15642 601 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 GSG1Q2KHT4 349 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 REP15Q6BDI9 236 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 KRT80Q6KB66 452 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 ULK3Q6PHR2 472 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 DHRS4L2Q6PKH6 230 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 DEF8Q6ZN54 512 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 SNX32Q86XE0 403 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 MIER2Q8N344 545 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 ANKRD42Q8N9B4 389 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 SCAIQ8N9R8 606 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 ZFAND2BQ8WV99 257 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 GTF2H4Q92759 462 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 ZNF75AQ96N20 296 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 EPYCQ99645 322 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 SPATA5L1Q9BVQ7 753 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 PAIP1Q9H074 479 aaKnown RBP10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 B3GAT2Q9NPZ5 323 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 KLHL14Q9P2G3 628 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 TESQ9UGI8 421 aaKnown RBP10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 FBXL3Q9UKT7 428 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 A0A087WUJ7 227 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 MS4A18H0YCH9 400 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 M0R3G1 203 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 UBDO15205 165 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 HLA-HP01893 362 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 ZNF35P13682 527 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 NQO1P15559 274 aaKnown RBP10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 ZNF14P17017 642 aaPredicted RBP10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 ITGA2P17301 1181 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 HOXB9P17482 250 aaPredicted RBP10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 ACHEP22303 614 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 HTR2AP28223 471 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 MRPL19P49406 292 aaKnown RBP10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 SLC18A1P54219 525 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 RPS23P62266 143 aaKnown RBP10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 TRMT5Q32P41 509 aaKnown RBP10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 MS4A18Q3C1V0 323 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 ELFN2Q5R3F8 820 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 PHYHD1Q5SRE7 291 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 ZNF813Q6ZN06 617 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 GLCCI1Q86VQ1 547 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 BHLHE22Q8NFJ8 381 aaPredicted RBP10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 OR9I1Q8NGQ6 314 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 MAL2Q969L2 176 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 SLC47A1Q96FL8 570 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 ASPNQ9BXN1 380 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 MRPL37Q9BZE1 423 aaKnown RBP10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 TPK1Q9H3S4 243 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 EVA1AQ9H8M9 152 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 REV1Q9UBZ9 1251 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 METRNQ9UJH8 293 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 POFUT2Q9Y2G5 429 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 NOX1Q9Y5S8 564 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 GMEB1Q9Y692 573 aa10.34□□□□□ -0.75
CBX3P4-202ENST00000540428 TMEM120BA0PK00 339 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 PRORSD1PA6NEY8 169 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 LYNX1G3V0Z9 82 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 SEC14L2O76054 403 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 HPRP00739 348 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 TFP02787 698 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 BGLAPP02818 100 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 LYNX1P0DP58 116 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 ARAFP10398 606 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 CD79AP11912 226 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 HLA-DOBP13765 273 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 GPR6P46095 362 aaPredicted RBP10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 TMEM33P57088 247 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 NCALDP61601 193 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 MRPS11P82912 194 aaKnown RBP10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 PUDPQ08623 228 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 SCGB2A2Q13296 93 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 FXNQ16595 210 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 MSMPQ1L6U9 139 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 LRIF1Q5T3J3 769 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 SWT1Q5T5J6 900 aaKnown RBP10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 REEP3Q6NUK4 255 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 SLC2A7Q6PXP3 512 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 NHLRC1Q6VVB1 395 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 MAVSQ7Z434 540 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 KRT73Q86Y46 540 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 GOLGA6L1Q8N7Z2 621 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 RDH5Q92781 318 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 OR52B2Q96RD2 323 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 FOXB1Q99853 325 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 RSPO3Q9BXY4 272 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms