RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 UNC119BA6NIH7 251 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 NUDT19A8MXV4 375 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 CDRT15L2A8MXV6 281 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 FAM25EA8MYX2 175 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 F8W735 103 aaPredicted RBP7□□□□□ -1.29
CCDC60-204ENST00000539847 TEX46H3BTG2 121 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 M0R3H8 397 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 KLK10O43240 276 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 EMC8O43402 210 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 CREBL2O60519 120 aaPredicted RBP7□□□□□ -1.29
CCDC60-204ENST00000539847 SELENOFO60613 162 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 RP2O75695 350 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 KRT33AO76009 404 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 HPP00738 406 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 HPXP02790 462 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 PRNPP04156 253 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 RPN2P04844 631 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 ITGB2P05107 769 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 CHRM4P08173 479 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 IFI6P09912 130 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 THEGLP0DJG4 465 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 GIMD1P0DJR0 217 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 CALCBP10092 127 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 SFTPCP11686 197 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 ICAM2P13598 275 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 CXCL2P19875 107 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 HNRNPA2B1P22626 353 aaKnown RBP7□□□□□ -1.29
CCDC60-204ENST00000539847 NTSP30990 170 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 GKP32189 559 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 GDNFP39905 211 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 CD79BP40259 229 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 TSFMP43897 325 aaKnown RBP7□□□□□ -1.29
CCDC60-204ENST00000539847 RECQLP46063 649 aaPredicted RBP7□□□□□ -1.29
CCDC60-204ENST00000539847 REEP5Q00765 189 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 SSBP1Q04837 148 aaKnown RBP7□□□□□ -1.29
CCDC60-204ENST00000539847 TGM3Q08188 693 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 CEBPEQ15744 281 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 ISXQ2M1V0 245 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 ZNF791Q3KP31 576 aaPredicted RBP7□□□□□ -1.29
CCDC60-204ENST00000539847 PIP5KL1Q5T9C9 394 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 ARHGAP40Q5TG30 622 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 ZNF626Q68DY1 528 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 LIN54Q6MZP7 749 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 RPL22L1Q6P5R6 122 aaKnown RBP7□□□□□ -1.29
CCDC60-204ENST00000539847 TMPRSS11FQ6ZWK6 438 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 TMUB2Q71RG4 321 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 PGAP1Q75T13 922 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 HSD11B1LQ7Z5J1 315 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 C17orf64Q86WR6 236 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 CPOQ8IVL8 374 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 CDH26Q8IXH8 852 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 ARL14Q8N4G2 192 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 ZFP41Q8N8Y5 198 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 OR11G2Q8NGC1 345 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 OR6C4Q8NGE1 309 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 LILRB1Q8NHL6 650 aaPredicted RBP7□□□□□ -1.29
CCDC60-204ENST00000539847 THEM6Q8WUY1 208 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 RNF141Q8WVD5 230 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 NAT6Q93015 286 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 RBM18Q96H35 190 aaKnown RBP7□□□□□ -1.29
CCDC60-204ENST00000539847 LINC00052Q96N35 136 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 ZFYVE21Q9BQ24 234 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 WFDC6Q9BQY6 131 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 RIOK2Q9BVS4 552 aaKnown RBP7□□□□□ -1.29
CCDC60-204ENST00000539847 SARGQ9BW04 601 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 HDAC8Q9BY41 377 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 GLIPR2Q9H4G4 154 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 MYOZ1Q9NP98 299 aaPredicted RBP7□□□□□ -1.29
CCDC60-204ENST00000539847 HINT3Q9NQE9 182 aaKnown RBP7□□□□□ -1.29
CCDC60-204ENST00000539847 CTPS2Q9NRF8 586 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 CMC2Q9NRP2 79 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 TAS2R8Q9NYW2 309 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 KLHL9Q9P2J3 617 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 EPHA6Q9UF33 1036 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 NDRG3Q9UGV2 375 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 SLC35A3Q9Y2D2 325 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 SIRT4Q9Y6E7 314 aaPredicted RBP7□□□□□ -1.29
CCDC60-204ENST00000539847 U3KQA8 63 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 NOTCH2Q04721 2471 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 A0A0A6YYD5 115 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 A0A0D9SG52 128 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 SPTY2D1-AS1A0A0U1RR47 76 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 UBE2QL1A1L167 161 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 SMIM30A4D0T7 59 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 CDHR4A6H8M9 788 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 OR5K4A6NMS3 321 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 A8MX80 341 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 ZNF879B4DU55 563 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 K7ESM1 405 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 ACOT7O00154 380 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 BHLHE40O14503 412 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 VEGFDO43915 354 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 NDUFB6O95139 128 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 TBX6O95947 436 aaPredicted RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 GBAP04062 536 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 GUSBP08236 651 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 CD3GP09693 182 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 SBK2P0C263 348 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 ANKRD34CP0C6C1 535 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 PF4V1P10720 104 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms