RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ADH7P40394 386 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 LTBQ06643 244 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.1□□□□□ -0.47
UBE3B-209ENST00000539584 TANGO2Q6ICL3 276 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 FAM122CQ6P4D5 195 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 LEG1Q6P5S2 330 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 ANKRD16Q6P6B7 361 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 SERPINA12Q8IW75 414 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 GPR148Q8TDV2 347 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 RNF166Q96A37 237 aaPredicted RBP12.1□□□□□ -0.47
UBE3B-209ENST00000539584 ADAD1Q96M93 576 aaKnown RBP12.1□□□□□ -0.47
UBE3B-209ENST00000539584 PCDH10Q9P2E7 1040 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 UPB1Q9UBR1 384 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 PDE4DIPQ5VU43 2346 aa12.09□□□□□ -0.47
UBE3B-209ENST00000539584 F5H5P2 479 aa12.09□□□□□ -0.47
UBE3B-209ENST00000539584 SULT1C2O00338 296 aa12.09□□□□□ -0.47
UBE3B-209ENST00000539584 DBPQ10586 325 aaPredicted RBP12.09□□□□□ -0.47
UBE3B-209ENST00000539584 LIPNQ5VXI9 398 aa12.09□□□□□ -0.47
UBE3B-209ENST00000539584 TMUB2Q71RG4 321 aa12.09□□□□□ -0.47
UBE3B-209ENST00000539584 FAM122BQ7Z309 247 aa12.09□□□□□ -0.47
UBE3B-209ENST00000539584 CDC20BQ86Y33 519 aa12.09□□□□□ -0.47
UBE3B-209ENST00000539584 CDH26Q8IXH8 852 aa12.09□□□□□ -0.47
UBE3B-209ENST00000539584 EXD3Q8N9H8 876 aa12.09□□□□□ -0.47
UBE3B-209ENST00000539584 ZNRF4Q8WWF5 429 aa12.09□□□□□ -0.47
UBE3B-209ENST00000539584 PIGKQ92643 395 aa12.09□□□□□ -0.47
UBE3B-209ENST00000539584 RIT1Q92963 219 aa12.09□□□□□ -0.47
UBE3B-209ENST00000539584 C3orf49Q96BT1 292 aa12.09□□□□□ -0.47
UBE3B-209ENST00000539584 CDV3Q9UKY7 258 aaKnown RBP12.09□□□□□ -0.47
UBE3B-209ENST00000539584 MRPS33Q9Y291 106 aaKnown RBP12.09□□□□□ -0.47
UBE3B-209ENST00000539584 MRPS2Q9Y399 296 aaKnown RBP12.09□□□□□ -0.47
UBE3B-209ENST00000539584 ABHD16AO95870 558 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 IGKV1D-16P01601 117 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 AKAIN1P0CW23 69 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 RPA2P15927 270 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 CSF2RBP32927 897 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 KIR2DL1P43626 348 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-209ENST00000539584 ERVK-25P63136 954 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 CCINQ13939 588 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 GPR18Q14330 331 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 GK2Q14410 553 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-209ENST00000539584 PXDC1Q5TGL8 231 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 WBP2NLQ6ICG8 309 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 C12orf76Q8N812 135 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-209ENST00000539584 OR5T3Q8NGG3 340 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 OR6K3Q8NGY3 331 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 OR10G6Q8NH81 332 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 CCDC107Q8WV48 283 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 EDAQ92838 391 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 KLHL15Q96M94 604 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 GABRG3Q99928 467 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 GINS4Q9BRT9 223 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 TTYH1Q9H313 450 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-209ENST00000539584 FRRS1LQ9P0K9 344 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 MRM2Q9UI43 246 aaKnown RBP12.08□□□□□ -0.48
UBE3B-209ENST00000539584 YBX2Q9Y2T7 364 aaKnown RBP12.08□□□□□ -0.48
UBE3B-209ENST00000539584 POM121BA6NF01 834 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 GGT3PA6NGU5 568 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 OR5K4A6NMS3 321 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 PYCARD-AS1I3L0S3 204 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 FGF2P09038 288 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 ITPKBP27987 946 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 NTSR1P30989 418 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 CENPAP49450 140 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 MAP2K6P52564 334 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 CLDN12P56749 244 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 ACTBP60709 375 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 YPEL5P62699 121 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 ACTG1P63261 375 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 IGLV3-21P80748 117 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-209ENST00000539584 BIKQ13323 160 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 PCGF3Q3KNV8 242 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 ITPRIPL2Q3MIP1 535 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 OR5M10Q6IEU7 315 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 FDX2Q6P4F2 183 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 GSG1LQ6UXU4 331 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 PRSS41Q7RTY9 318 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 TMPRSS12Q86WS5 348 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 PDZD9Q8IXQ8 264 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 RCBTB1Q8NDN9 531 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 OR2AK2Q8NG84 335 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 GCDHQ92947 438 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-209ENST00000539584 RASD2Q96D21 266 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 SMAD5Q99717 465 aaKnown RBP12.08□□□□□ -0.48
UBE3B-209ENST00000539584 CCDC3Q9BQI4 270 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 DNTTIP1Q9H147 329 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 WDR76Q9H967 626 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 EXOSC3Q9NQT5 275 aaKnown RBP12.08□□□□□ -0.48
UBE3B-209ENST00000539584 ZNF107Q9UII5 783 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-209ENST00000539584 LAMP5Q9UJQ1 280 aa12.08□□□□□ -0.48
UBE3B-209ENST00000539584 TMEM72A0PK05 275 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 ELOA3DA6NLF2 546 aaPredicted RBP12.07□□□□□ -0.48
UBE3B-209ENST00000539584 OR4C45A6NMZ5 311 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 CDC40O60508 579 aaKnown RBP eCLIP12.07□□□□□ -0.48
UBE3B-209ENST00000539584 HRGP04196 525 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 NAGAP17050 411 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 ADRA2CP18825 462 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 CSRP1P21291 193 aaKnown RBP12.07□□□□□ -0.48
UBE3B-209ENST00000539584 AGTR1P30556 359 aa12.07□□□□□ -0.48
UBE3B-209ENST00000539584 CD96P40200 585 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms