RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 TP53P04637 393 aaPredicted RBP11.52□□□□□ -0.57
CCDC42-202ENST00000539522 FCGR2AP12318 317 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 ESRRGP62508 458 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 LGALS3BPQ08380 585 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 NPRL3Q12980 569 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 IL18R1Q13478 541 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 RNPS1Q15287 305 aaKnown RBP11.52□□□□□ -0.57
CCDC42-202ENST00000539522 POU4F3Q15319 338 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 SF3B4Q15427 424 aaKnown RBP eCLIP11.52□□□□□ -0.57
CCDC42-202ENST00000539522 HSPB2Q16082 182 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 ZNF474Q6S9Z5 364 aaPredicted RBP11.52□□□□□ -0.57
CCDC42-202ENST00000539522 CREB3L2Q70SY1 520 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 H1FNTQ75WM6 255 aaPredicted RBP11.52□□□□□ -0.57
CCDC42-202ENST00000539522 FAM214BQ7L5A3 538 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 GALNT5Q7Z7M9 940 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 PARP8Q8N3A8 854 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 SCAIQ8N9R8 606 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 OR9K2Q8NGE7 335 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 OR13C2Q8NGS9 318 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 OR5J2Q8NH18 312 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 LILRB4Q8NHJ6 448 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 PIGXQ8TBF5 258 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 TXNDC15Q96J42 360 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 ZFP3Q96NJ6 502 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 MBOAT4Q96T53 435 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 TAPBPLQ9BX59 468 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 ANKRD60Q9BZ19 345 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 OPN3Q9H1Y3 402 aaPredicted RBP11.52□□□□□ -0.57
CCDC42-202ENST00000539522 MCCC2Q9HCC0 563 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 NPDC1Q9NQX5 325 aaPredicted RBP11.52□□□□□ -0.57
CCDC42-202ENST00000539522 ZNF629Q9UEG4 869 aaPredicted RBP11.52□□□□□ -0.57
CCDC42-202ENST00000539522 USP9YO00507 2555 aaPredicted RBP11.51□□□□□ -0.57
CCDC42-202ENST00000539522 TRAV27A0A087WT01 109 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 ZNF432O94892 652 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 AGFG2O95081 481 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 IL18BPO95998 194 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 CRHP06850 196 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 YES1P07947 543 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 POU2F1P14859 743 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 BMP5P22003 454 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 MYF6P23409 242 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 CHRNB4P30926 498 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 AQP2P41181 271 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 GSSP48637 474 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 FOXG1P55316 489 aaPredicted RBP11.51□□□□□ -0.57
CCDC42-202ENST00000539522 RPL18Q07020 188 aaKnown RBP11.51□□□□□ -0.57
CCDC42-202ENST00000539522 ZP4Q12836 540 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 OR2A2Q6IF42 318 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 TFAP2EQ6VUC0 442 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 THSD4Q6ZMP0 1018 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 USP51Q70EK9 711 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 LINGO2Q7L985 606 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 KIF18BQ86Y91 864 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 SLC43A2Q8N370 569 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 ZNF808Q8N4W9 903 aaPredicted RBP11.51□□□□□ -0.57
CCDC42-202ENST00000539522 ZNF610Q8N9Z0 462 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 SSC4DQ8WTU2 575 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 GTPBP3Q969Y2 492 aaKnown RBP11.51□□□□□ -0.57
CCDC42-202ENST00000539522 CNBD2Q96M20 576 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 TNFRSF13CQ96RJ3 184 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 NIPSNAP1Q9BPW8 284 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 NAA11Q9BSU3 229 aaPredicted RBP11.51□□□□□ -0.57
CCDC42-202ENST00000539522 SF3B5Q9BWJ5 86 aaKnown RBP11.51□□□□□ -0.57
CCDC42-202ENST00000539522 SFXN3Q9BWM7 321 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 GABARAPL3Q9BY60 117 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 PRRG4Q9BZD6 226 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 GRIP2Q9C0E4 1043 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 RIBC2Q9H4K1 309 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 GP6Q9HCN6 339 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 NANSQ9NR45 359 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 PLSCR4Q9NRQ2 329 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 PRSS50Q9UI38 385 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 B3GALT5Q9Y2C3 310 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 HIF3AQ9Y2N7 669 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 CORINQ9Y5Q5 1042 aa11.51□□□□□ -0.57
CCDC42-202ENST00000539522 A8MXE2 369 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 IGFBP1P08833 259 aaPredicted RBP11.5□□□□□ -0.57
CCDC42-202ENST00000539522 OSMP13725 252 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 AGAP20933 346 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 POLR2IP36954 125 aaKnown RBP11.5□□□□□ -0.57
CCDC42-202ENST00000539522 SELENOPP49908 381 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 CRISP1P54107 249 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 RUNX1T1Q06455 604 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 TSPAN31Q12999 210 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 PMS2P3Q13401 168 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 KEAP1Q14145 624 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 PHYHD1Q5SRE7 291 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 KLHL17Q6TDP4 642 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 MAMDC2Q7Z304 686 aaPredicted RBP11.5□□□□□ -0.57
CCDC42-202ENST00000539522 GPAT4Q86UL3 456 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 C10orf53Q8N6V4 93 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 CNEP1R1Q8N9A8 125 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 ACBD4Q8NC06 268 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 OR6K3Q8NGY3 331 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 TMEM45BQ96B21 275 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 ZNF570Q96NI8 536 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 OXGR1Q96P68 337 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 C12orf49Q9H741 205 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 GLRX2Q9NS18 164 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 MED29Q9NX70 200 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms