RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 EHFQ9NZC4 300 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 NTNG1Q9Y2I2 539 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 TRDV1A0A1B0GX56 115 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 ZC3H12DA2A288 527 aaKnown RBP13.41□□□□□ -0.26
CACNB1-206ENST00000539338 TMEM212A6NML5 194 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 HOXC11O43248 304 aaPredicted RBP13.41□□□□□ -0.26
CACNB1-206ENST00000539338 HCRTR1O43613 425 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 ZDHHC11BP0C7U3 371 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 GDF1P27539 372 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 ETV1P50549 477 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 TPMTP51580 245 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 MLC1Q15049 377 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 DUSP5Q16690 384 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 NANOGP1Q8N7R0 232 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 FGF22Q9HCT0 170 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 ZFP57Q9NU63 452 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 FBXL2Q9UKC9 423 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 SLC22A7Q9Y694 548 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 GALR3O60755 368 aaPredicted RBP13.41□□□□□ -0.26
CACNB1-206ENST00000539338 SERPINE2P07093 398 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 LIM2P55344 173 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 RAP2BP61225 183 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 CAMK2DQ13557 499 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 PRAMEF20Q5VT98 475 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 C9orf135Q5VTT2 229 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 SAXO2Q658L1 398 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 IDO2Q6ZQW0 420 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 SLC35B4Q969S0 331 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 WASH6PQ9NQA3 447 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.4□□□□□ -0.26
CACNB1-206ENST00000539338 TMEM82A0PJX8 343 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 SELENOFO60613 162 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 UBL3O95164 117 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 POU3F2P20265 443 aaPredicted RBP13.4□□□□□ -0.26
CACNB1-206ENST00000539338 MRPL58Q14197 206 aaKnown RBP13.4□□□□□ -0.26
CACNB1-206ENST00000539338 RBMS2Q15434 407 aaKnown RBP13.4□□□□□ -0.26
CACNB1-206ENST00000539338 NLRP8Q86W28 1048 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 LINC00346Q8IVM7 164 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 OR5H6Q8NGV6 325 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 OR6F1Q8NGZ6 308 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 VRK1Q99986 396 aaPredicted RBP13.4□□□□□ -0.26
CACNB1-206ENST00000539338 ULBP2Q9BZM5 246 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 MOKQ9UQ07 419 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 TCRBP04435 133 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 SLC35E2P0CK97 266 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 IL10RAQ13651 578 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 ZNF77Q15935 545 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 EXOSC6Q5RKV6 272 aaKnown RBP13.4□□□□□ -0.26
CACNB1-206ENST00000539338 AADACL4Q5VUY2 407 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 PLCXD3Q63HM9 321 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 OR14A16Q8NHC5 309 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 MS4A6EQ96DS6 147 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 ARSGQ96EG1 525 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 DUS3LQ96G46 650 aaKnown RBP13.4□□□□□ -0.26
CACNB1-206ENST00000539338 NUP205Q92621 2012 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 TMPRSS11DO60235 418 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 CRYABP02511 175 aaKnown RBP13.4□□□□□ -0.26
CACNB1-206ENST00000539338 APLNRP35414 380 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 POLR2HP52434 150 aaKnown RBP13.4□□□□□ -0.26
CACNB1-206ENST00000539338 MC2RQ01718 297 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 CADM3Q8N126 398 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 DNAAF1Q8NEP3 725 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 MUCL1Q96DR8 90 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 SEC22AQ96IW7 307 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 P2RX6O15547 441 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 HTR2CP28335 458 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 SLC19A1P41440 591 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 LUMP51884 338 aaPredicted RBP13.4□□□□□ -0.26
CACNB1-206ENST00000539338 CYHR1Q6ZMK1 362 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 CADM4Q8NFZ8 388 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 IL1F10Q8WWZ1 152 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 NICN1Q9BSH3 213 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 WDR76Q9H967 626 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 RPS10P5Q9NQ39 176 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 LRFN1Q9P244 771 aa13.4□□□□□ -0.26
CACNB1-206ENST00000539338 CCDC163A0A0D9SF12 145 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 A0A1W2PR48 441 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 PRRT4C9JH25 899 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 LGI1O95970 557 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 EPHA5P54756 1037 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 DYRK1AQ13627 763 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 CNN3Q15417 329 aaKnown RBP13.39□□□□□ -0.27
CACNB1-206ENST00000539338 ZMAT1Q5H9K5 638 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 OPN5Q6U736 354 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 RIMKLAQ8IXN7 391 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 OR13H1Q8NG92 308 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 OR4D6Q8NGJ1 314 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 OR52N1Q8NH53 320 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 PIGCQ92535 297 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 LYSMD1Q96S90 227 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 SPIN2AQ99865 258 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 SPIN2BQ9BPZ2 258 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 KLHL13Q9P2N7 655 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 TSPAN11A1L157 253 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 ZNF254O75437 659 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 RAB6AP20340 208 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 CX3CR1P49238 355 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 C14orf28Q4W4Y0 310 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 TMEM201Q5SNT2 666 aa13.39□□□□□ -0.27
CACNB1-206ENST00000539338 ACSM5Q6NUN0 579 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms