RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 MAMDC2Q7Z304 686 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-205ENST00000538545 DPY19L4Q7Z388 723 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 SLC22A8Q8TCC7 542 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 SMURF1Q9HCE7 757 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 FAM86C1Q9NVL1 165 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 DNAJC13O75165 2243 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 MGAQ8IWI9 3026 aa12.73□□□□□ -0.37
ACTN1-205ENST00000538545 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 MT-ND5P03915 603 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 ZNF883P0CG24 379 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 OR8G3PP0DMU2 310 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 LCN1P31025 176 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 TNFSF8P32971 234 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 S100A5P33763 92 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 RORCP51449 518 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 OR10A3P58181 314 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 SLC35D2Q76EJ3 337 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 NUP54Q7Z3B4 507 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 PPP1R32Q7Z5V6 425 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 CENPSQ8N2Z9 138 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 EXD3Q8N9H8 876 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 OR6N2Q8NGY6 317 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 GHSRQ92847 366 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 ABCB9Q9NP78 766 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 TRIM36Q9NQ86 728 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 NXT1Q9UKK6 140 aaKnown RBP12.72□□□□□ -0.37
ACTN1-205ENST00000538545 A0A0G2JMM0 328 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 A0A1W2PPB8 328 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 A0A1W2PRS3 328 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 KIR3DP1A8MWS1 328 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 ZNF814B7Z6K7 855 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 FTCDNL1E5RQL4 147 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 RAMP1O60894 148 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 HLA-DQA2P01906 255 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 CD40LGP29965 261 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 GPR85P60893 370 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 PLPPR5Q32ZL2 321 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 OR8K3Q8NH51 312 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 SNRNP27Q8WVK2 155 aaKnown RBP12.72□□□□□ -0.37
ACTN1-205ENST00000538545 SLC25A46Q96AG3 418 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 PGLYRP3Q96LB9 341 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 C5orf34Q96MH7 638 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 WDR12Q9GZL7 423 aaKnown RBP12.72□□□□□ -0.37
ACTN1-205ENST00000538545 INIPQ9NRY2 104 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 HAO2Q9NYQ3 351 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 NCDNQ9UBB6 729 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 COMMD3Q9UBI1 195 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 MALT1Q9UDY8 824 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 PCDHGA5Q9Y5G8 931 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 ZNF407Q9C0G0 2248 aa12.72□□□□□ -0.37
ACTN1-205ENST00000538545 IGKV1D-43A0A0B4J1Z2 117 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 LINC00854A0A1B0GVQ3 168 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 ANKRD61A6NGH8 418 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 MS4A18H0YCH9 400 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 PLPP3O14495 311 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 DOK2O60496 412 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 GLCEO94923 617 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 OR6A2O95222 327 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 CTLA4P16410 223 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 TMED10P49755 219 aaKnown RBP12.71□□□□□ -0.37
ACTN1-205ENST00000538545 ZNF41P51814 821 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-205ENST00000538545 IL10RAQ13651 578 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 SGCBQ16585 318 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 MS4A18Q3C1V0 323 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 CD200R1LQ6Q8B3 271 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 C6orf15Q6UXA7 325 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-205ENST00000538545 TMEM156Q8N614 296 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 ASB15Q8WXK1 588 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 LRFN5Q96NI6 719 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 ZNF700Q9H0M5 742 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 PARD6AQ9NPB6 346 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 AKAP7Q9P0M2 348 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-205ENST00000538545 A0A1B0GVC2 190 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 A6NIN4 97 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 SLC16A7O60669 478 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 WNT11O96014 354 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 IFNGR1P15260 489 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 NANOS3P60323 173 aaKnown RBP12.71□□□□□ -0.37
ACTN1-205ENST00000538545 HES3Q5TGS1 186 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 RPS19BP1Q86WX3 136 aaKnown RBP12.71□□□□□ -0.37
ACTN1-205ENST00000538545 C7orf57Q8NEG2 295 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 TMEM234Q8WY98 164 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 TTC9Q92623 222 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 PROK2Q9HC23 129 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 DAPK2Q9UIK4 370 aa12.71□□□□□ -0.37
ACTN1-205ENST00000538545 KMT2EQ8IZD2 1858 aa12.71□□□□□ -0.38
ACTN1-205ENST00000538545 TRDV1A0A1B0GX56 115 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 B4E171 279 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 H0YC42 278 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 TSPAN7P41732 249 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 POU3F1Q03052 451 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-205ENST00000538545 GDPGP1Q6ZNW5 385 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 DCDC5Q6ZRR9 648 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 OR2M3Q8NG83 312 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 OIT3Q8WWZ8 545 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 S100ZQ8WXG8 99 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 CEP19Q96LK0 163 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 CCNL2Q96S94 520 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-205ENST00000538545 JAM3Q9BX67 310 aa12.7□□□□□ -0.38
ACTN1-205ENST00000538545 MIXL1Q9H2W2 232 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms