RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	TSNARE1	Q96NA8	513 aa		3.78	□□□□□ -1.8
PRKDC-208	ENST00000536710	TMEM246	Q9BRR3	403 aa		3.78	□□□□□ -1.8
PRKDC-208	ENST00000536710	RANBP3	Q9H6Z4	567 aa	Predicted RBP	3.78	□□□□□ -1.8
PRKDC-208	ENST00000536710	CALY	Q9NYX4	217 aa		3.78	□□□□□ -1.8
PRKDC-208	ENST00000536710	ADAM22	Q9P0K1	906 aa		3.78	□□□□□ -1.8
PRKDC-208	ENST00000536710	CDHR2	Q9BYE9	1310 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	GJE1	A6NN92	205 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	DFNA5	O60443	496 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	NPIPB7	O75200	414 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	AGT	P01019	485 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	IGLV1-47	P01700	117 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	ALDOB	P05062	364 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	CRYGB	P07316	175 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	PABPC4L	P0CB38	370 aa	Known RBP	3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	CHTF8	P0CG12	524 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	ZNF24	P17028	368 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	ACLY	P53396	1101 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	SH3BGR	P55822	239 aa	Predicted RBP	3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	GNB2	P62879	340 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	IL34	Q6ZMJ4	242 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	NIPA1	Q7RTP0	329 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	THOC6	Q86W42	341 aa	Known RBP	3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	PUSL1	Q8N0Z8	303 aa	Known RBP	3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	B3GNT7	Q8NFL0	401 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	PLPPR1	Q8TBJ4	325 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	SLC22A8	Q8TCC7	542 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	NDRG1	Q92597	394 aa	Known RBP	3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	MED8	Q96G25	268 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	RARRES2	Q99969	163 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	RIOK2	Q9BVS4	552 aa	Known RBP	3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	SRMS	Q9H3Y6	488 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	NANOG	Q9H9S0	305 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	INPP5E	Q9NRR6	644 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	GLRX2	Q9NS18	164 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	EXD2	Q9NVH0	621 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	RAB20	Q9NX57	234 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	NEUROG3	Q9Y4Z2	214 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	LRRK1	Q38SD2	2015 aa		3.77	□□□□□ -1.81
PRKDC-208	ENST00000536710	IGHV2-5	P01817	119 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	CT62	P0C5K7	136 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	HPGD	P15428	266 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	CDH6	P55285	790 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	NUP107	P57740	925 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	FBXW4	P57775	412 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	MRPS22	P82650	360 aa	Known RBP	3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	IDI1	Q13907	227 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	CASC10	Q5T4H9	136 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	RAET1L	Q5VY80	246 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	METAP1D	Q6UB28	335 aa	Predicted RBP	3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	C6orf89	Q6UWU4	347 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	CCDC73	Q6ZRK6	1079 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	ASCL5	Q7RTU5	278 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	ZNF557	Q8N988	423 aa	Predicted RBP	3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	CCDC54	Q8NEL0	328 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	SDR42E1	Q8WUS8	393 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	RDH5	Q92781	318 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	FGF14	Q92915	247 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	NRIP2	Q9BQI9	281 aa		3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	ILKAP	Q9H0C8	392 aa	Predicted RBP	3.76	□□□□□ -1.81
PRKDC-208	ENST00000536710	FRMPD3	Q5JV73	1810 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710		A0A075B6Q4	140 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	OR2AG2	A6NM03	316 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710		C9JVG2	144 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	FGG	P02679	453 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	SUB1	P53999	127 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	PSG7	Q13046	419 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	KIAA0087	Q14695	138 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	ARHGAP19	Q14CB8	494 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	LCE3C	Q5T5A8	94 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	SLC8B1	Q6J4K2	584 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	LCN12	Q6JVE5	192 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	SLC25A48	Q6ZT89	311 aa	Known RBP	3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	SUMF2	Q8NBJ7	301 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	FAM81A	Q8TBF8	368 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	GPR151	Q8TDV0	419 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	CCDC126	Q96EE4	140 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	NAP1L5	Q96NT1	182 aa	Predicted RBP	3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	SH3GL1	Q99961	368 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	KCTD14	Q9BQ13	255 aa	Predicted RBP	3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	OR11A1	Q9GZK7	315 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	CLMP	Q9H6B4	373 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	CLCF1	Q9UBD9	225 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	PITPNC1	Q9UKF7	332 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	NSD2	O96028	1365 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	MSH6	P52701	1360 aa		3.75	□□□□□ -1.81
PRKDC-208	ENST00000536710	ARHGAP23	Q9P227	1491 aa		3.74	□□□□□ -1.81
PRKDC-208	ENST00000536710	SMCO2	A6NFE2	343 aa		3.74	□□□□□ -1.81
PRKDC-208	ENST00000536710	FAM189A1	O60320	539 aa		3.74	□□□□□ -1.81
PRKDC-208	ENST00000536710	INS	P01308	110 aa		3.74	□□□□□ -1.81
PRKDC-208	ENST00000536710	FTH1	P02794	183 aa		3.74	□□□□□ -1.81
PRKDC-208	ENST00000536710	ANXA5	P08758	320 aa		3.74	□□□□□ -1.81
PRKDC-208	ENST00000536710	ELK1	P19419	428 aa		3.74	□□□□□ -1.81
PRKDC-208	ENST00000536710	SLC26A3	P40879	764 aa		3.74	□□□□□ -1.81
PRKDC-208	ENST00000536710	SYK	P43405	635 aa		3.74	□□□□□ -1.81
PRKDC-208	ENST00000536710	GPR6	P46095	362 aa	Predicted RBP	3.74	□□□□□ -1.81
PRKDC-208	ENST00000536710	NPBWR2	P48146	333 aa		3.74	□□□□□ -1.81
PRKDC-208	ENST00000536710	PRRX1	P54821	245 aa		3.74	□□□□□ -1.81
PRKDC-208	ENST00000536710	UNC119	Q13432	240 aa		3.74	□□□□□ -1.81
PRKDC-208	ENST00000536710	LRRC10	Q5BKY1	277 aa		3.74	□□□□□ -1.81
PRKDC-208	ENST00000536710	LRRC66	Q68CR7	880 aa		3.74	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms