RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 HAO2Q9NYQ3 351 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 CHMP5Q9NZZ3 219 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 PPP2R2CQ9Y2T4 447 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 SLC6A5Q9Y345 797 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 TMED3Q9Y3Q3 217 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 ANGPTL3Q9Y5C1 460 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 MMP24Q9Y5R2 645 aa4.47□□□□□ -1.69
CLIP1-207ENST00000536634 MAGED1Q9Y5V3 778 aaPredicted RBP4.47□□□□□ -1.69
CLIP1-207ENST00000536634 EXPH5Q8NEV8 1989 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 A0A096LNT2 108 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 A0A1W2PPM1 405 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 A8MXE2 369 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 GOLGA8KD6RF30 607 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 GOLGA8TH3BQL2 631 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 DYNC1I1O14576 645 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 TNFSF13O75888 250 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 SERPIND1P05546 499 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 SMIM10L1P0DMW3 83 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 RNH1P13489 461 aaKnown RBP4.46□□□□□ -1.7
CLIP1-207ENST00000536634 ACVR1BP36896 505 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 HSD17B2P37059 387 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 SLC1A1P43005 524 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 TTPAP49638 278 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 HERV-K104P61576 105 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 KCNJ2P63252 427 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 CRADDP78560 199 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 CUL1Q13616 776 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 PARP6Q2NL67 630 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 ZNF791Q3KP31 576 aaPredicted RBP4.46□□□□□ -1.7
CLIP1-207ENST00000536634 UGT3A2Q3SY77 523 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 ZNF613Q6PF04 617 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 HSDL2Q6YN16 418 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 BTN2A1Q7KYR7 527 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 NUDT13Q86X67 352 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 RCOR2Q8IZ40 523 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 GCNT2Q8N0V5 402 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 OR10G3Q8NGC4 313 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 OR8K1Q8NGG5 319 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 SLC22A8Q8TCC7 542 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 NT5CQ8TCD5 201 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 PAQR8Q8TEZ7 354 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 ZBED6CLQ96FA7 236 aaPredicted RBP4.46□□□□□ -1.7
CLIP1-207ENST00000536634 SMIM10Q96HG1 83 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 JSRP1Q96MG2 331 aaPredicted RBP4.46□□□□□ -1.7
CLIP1-207ENST00000536634 DGAT2Q96PD7 388 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 PPP1R2P1Q96PQ5 205 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 SFXN3Q9BWM7 321 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 UBQLN3Q9H347 655 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 MYNNQ9NPC7 610 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 ADAP2Q9NPF8 381 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 CCDC177Q9NQR7 707 aaPredicted RBP4.46□□□□□ -1.7
CLIP1-207ENST00000536634 CHRAC1Q9NRG0 131 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 CPSF2Q9P2I0 782 aaKnown RBP4.46□□□□□ -1.7
CLIP1-207ENST00000536634 GRID1Q9ULK0 1009 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 STUB1Q9UNE7 303 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 MMACHCQ9Y4U1 282 aa4.46□□□□□ -1.7
CLIP1-207ENST00000536634 WNK1Q9H4A3 2382 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 IGLV7-46A0A075B6I9 117 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 IGKV3D-20A0A0C4DH25 116 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 A0A0G2JN53 185 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 GFYI3L273 518 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 PSMD12O00232 456 aaPredicted RBP4.45□□□□□ -1.7
CLIP1-207ENST00000536634 OR1F1O43749 312 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 TRIM3O75382 744 aaPredicted RBP4.45□□□□□ -1.7
CLIP1-207ENST00000536634 ERAL1O75616 437 aaKnown RBP4.45□□□□□ -1.7
CLIP1-207ENST00000536634 RCBTB2O95199 551 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 ETHE1O95571 254 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 ACSL3O95573 720 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 GDF1P27539 372 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 CDK9P50750 372 aaKnown RBP4.45□□□□□ -1.7
CLIP1-207ENST00000536634 ASPHQ12797 758 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 CDH17Q12864 832 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 HSPB3Q12988 150 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 EIPR1Q53HC9 387 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 PIGGQ5H8A4 983 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 NHSL2Q5HYW2 709 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 C6orf163Q5TEZ5 329 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 SLC22A10Q63ZE4 541 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 OPN5Q6U736 354 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 SASS6Q6UVJ0 657 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 CYHR1Q6ZMK1 362 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 Q6ZRP5 223 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 DNM1P46Q6ZS02 220 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 IL17RELQ6ZVW7 336 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 NUP54Q7Z3B4 507 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 PRUNE1Q86TP1 453 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 C17orf64Q86WR6 236 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 LRRC6Q86X45 466 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 HOGA1Q86XE5 327 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 C9orf40Q8IXQ3 194 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 ARIH2OSQ8N7S6 290 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 PRELID2Q8N945 189 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 TC2NQ8N9U0 490 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 OR4K1Q8NGD4 311 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 LRRC45Q96CN5 670 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 NTNG2Q96CW9 530 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 OR4K3Q96R72 315 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 EGFL8Q99944 293 aa4.45□□□□□ -1.7
CLIP1-207ENST00000536634 MED18Q9BUE0 208 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms