RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 COL1A2P08123 1366 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 USP6P35125 1406 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 FRMPD3Q5JV73 1810 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 H3BMQ9 156 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 GOLGA8SH3BPF8 625 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 TRDMT1O14717 391 aaKnown RBP2.36□□□□□ -2.03
VBP1-203ENST00000535916 DIRAS1O95057 198 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 TMEM50AO95807 157 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 SNAI1O95863 264 aaPredicted RBP2.36□□□□□ -2.03
VBP1-203ENST00000535916 P04436 131 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 ZNF43P17038 809 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 GSTM3P21266 225 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 MSR1P21757 451 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 GCAP28676 217 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 CD80P33681 288 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 OPRD1P41143 372 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 MAP3K8P41279 467 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 HSPA2P54652 639 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 CDK16Q00536 496 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 IRF8Q02556 426 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 ZNF154Q13106 437 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 TGFBIQ15582 683 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 MRPL23Q16540 153 aaKnown RBP2.36□□□□□ -2.03
VBP1-203ENST00000535916 KLHL38Q2WGJ6 581 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 DMRTC1Q5HYR2 192 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 PLCXD3Q63HM9 321 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 SSX9Q7RTT3 188 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 MICU2Q8IYU8 434 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 SPERTQ8NA61 448 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 OR4F6Q8NGB9 312 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 OR9A4Q8NGU2 314 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 DTX3LQ8TDB6 740 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 GPX8Q8TED1 209 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 MAIP1Q8WWC4 291 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 IL1F10Q8WWZ1 152 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 TOP1MTQ969P6 601 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 SGK3Q96BR1 496 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 LRRC39Q96DD0 335 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 SDSLQ96GA7 329 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 TIMD4Q96H15 378 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 NRTNQ99748 197 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 P2RY13Q9BPV8 354 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 SLC35A5Q9BS91 424 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 ILKAPQ9H0C8 392 aaPredicted RBP2.36□□□□□ -2.03
VBP1-203ENST00000535916 BLZF1Q9H2G9 400 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 SMYD3Q9H7B4 428 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 NMRAL1Q9HBL8 299 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 LYRM4Q9HD34 91 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 EHFQ9NZC4 300 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 PSMC3IPQ9P2W1 217 aaPredicted RBP2.36□□□□□ -2.03
VBP1-203ENST00000535916 PITPNC1Q9UKF7 332 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 STARD10Q9Y365 291 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 USP16Q9Y5T5 823 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 PEX16Q9Y5Y5 336 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 CACNG2Q9Y698 323 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 NEURL4Q96JN8 1562 aa2.36□□□□□ -2.03
VBP1-203ENST00000535916 SMCO3A2RU48 225 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 CCDC182A6NF36 153 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 PP2D1A8MPX8 630 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 ZNF701M0R085 212 aaPredicted RBP2.35□□□□□ -2.03
VBP1-203ENST00000535916 CLOCKO15516 846 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 PFKFB2O60825 505 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 FLOT1O75955 427 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 ATP5LO75964 103 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 AP2A1O95782 977 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 CSTAP01040 98 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 ERCC1P07992 297 aaPredicted RBP2.35□□□□□ -2.03
VBP1-203ENST00000535916 TNNI1P19237 187 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 CD9P21926 228 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 U2AF2P26368 475 aaKnown RBP eCLIP2.35□□□□□ -2.03
VBP1-203ENST00000535916 HMGB2P26583 209 aaKnown RBP2.35□□□□□ -2.03
VBP1-203ENST00000535916 GNPDA1P46926 289 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 DAOAP59103 153 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 RAB11AP62491 216 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 PAX5Q02548 391 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 ST3GAL3Q11203 375 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 ILKQ13418 452 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 ITIH4Q14624 930 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 RAB11BQ15907 218 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 CYP51A1Q16850 503 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 OR8G2PQ6IF36 304 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 SASS6Q6UVJ0 657 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 ENPP6Q6UWR7 440 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 LRRC31Q6UY01 552 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 FRA10AC1Q70Z53 315 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 TPRA1Q86W33 373 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 GABRG1Q8N1C3 465 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 OR2L13Q8N349 312 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 CSGALNACT2Q8N6G5 542 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 NEIL3Q8TAT5 605 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 DCUN1D4Q92564 292 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 OR5B2Q96R09 309 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 RAB34Q9BZG1 259 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 NEUROG2Q9H2A3 272 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 PPDPFQ9H3Y8 114 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 NXF3Q9H4D5 531 aaKnown RBP2.35□□□□□ -2.03
VBP1-203ENST00000535916 RGCCQ9H4X1 137 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 ELOVL6Q9H5J4 265 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 HAUS4Q9H6D7 363 aa2.35□□□□□ -2.03
VBP1-203ENST00000535916 C8orf33Q9H7E9 229 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms