RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 PIGTQ969N2 578 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 OXGR1Q96P68 337 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 USB1Q9BQ65 265 aaKnown RBP14.35□□□□□ -0.11
ATL3-202ENST00000535789 DENND2DQ9H6A0 471 aaPredicted RBP14.35□□□□□ -0.11
ATL3-202ENST00000535789 EVA1AQ9H8M9 152 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 UPB1Q9UBR1 384 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 SLC13A4Q9UKG4 626 aa14.35□□□□□ -0.11
ATL3-202ENST00000535789 RRP15Q9Y3B9 282 aaKnown RBP14.35□□□□□ -0.11
ATL3-202ENST00000535789 NIPBLQ6KC79 2804 aaeCLIP14.35□□□□□ -0.11
ATL3-202ENST00000535789 YLPM1P49750 1951 aaKnown RBP14.34□□□□□ -0.11
ATL3-202ENST00000535789 GSTA4O15217 222 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 OR2T1O43869 369 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 SMPD2O60906 423 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 PAX1P15863 534 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 ACTR3P61158 418 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 CCNIQ14094 377 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 KPNB1Q14974 876 aaKnown RBP14.34□□□□□ -0.11
ATL3-202ENST00000535789 INTS11Q5TA45 600 aaKnown RBP14.34□□□□□ -0.11
ATL3-202ENST00000535789 GLYATQ6IB77 296 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 H1FNTQ75WM6 255 aaPredicted RBP14.34□□□□□ -0.11
ATL3-202ENST00000535789 CARM1Q86X55 608 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 DHFR2Q86XF0 187 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 POMGNT2Q8NAT1 580 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 OR1K1Q8NGR3 316 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 RNF217Q8TC41 542 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 FBXW5Q969U6 566 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 ZNF837Q96EG3 531 aaPredicted RBP14.34□□□□□ -0.11
ATL3-202ENST00000535789 BOD1Q96IK1 185 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 OR2M2Q96R28 347 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 C1QTNF6Q9BXI9 259 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 GSX2Q9BZM3 304 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 GORASP2Q9H8Y8 452 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 SLC7A7Q9UM01 511 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 RCE1Q9Y256 329 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 B3GALT5Q9Y2C3 310 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 MAGED1Q9Y5V3 778 aaPredicted RBP14.34□□□□□ -0.11
ATL3-202ENST00000535789 TLN2Q9Y4G6 2542 aa14.34□□□□□ -0.11
ATL3-202ENST00000535789 TCRBV5S2A0A599 114 aa14.33□□□□□ -0.12
ATL3-202ENST00000535789 ZNF503-AS2A6NEH8 195 aa14.33□□□□□ -0.12
ATL3-202ENST00000535789 OVOL3O00110 214 aa14.33□□□□□ -0.12
ATL3-202ENST00000535789 CD8AP01732 235 aa14.33□□□□□ -0.12
ATL3-202ENST00000535789 CDH2P19022 906 aaPredicted RBP14.33□□□□□ -0.12
ATL3-202ENST00000535789 CD40P25942 277 aa14.33□□□□□ -0.12
ATL3-202ENST00000535789 GTF2E2P29084 291 aaKnown RBP14.33□□□□□ -0.12
ATL3-202ENST00000535789 ELF3P78545 371 aaPredicted RBP14.33□□□□□ -0.12
ATL3-202ENST00000535789 OR7E24Q6IFN5 339 aa14.33□□□□□ -0.12
ATL3-202ENST00000535789 CYP2R1Q6VVX0 501 aa14.33□□□□□ -0.12
ATL3-202ENST00000535789 SLC46A3Q7Z3Q1 461 aa14.33□□□□□ -0.12
ATL3-202ENST00000535789 CIARTQ8N365 385 aaPredicted RBP14.33□□□□□ -0.12
ATL3-202ENST00000535789 C17orf78Q8N4C9 275 aa14.33□□□□□ -0.12
ATL3-202ENST00000535789 MUCL1Q96DR8 90 aa14.33□□□□□ -0.12
ATL3-202ENST00000535789 LINC00470Q9BZP3 86 aa14.33□□□□□ -0.12
ATL3-202ENST00000535789 GSX1Q9H4S2 264 aaPredicted RBP14.33□□□□□ -0.12
ATL3-202ENST00000535789 SEC61A2Q9H9S3 476 aa14.33□□□□□ -0.12
ATL3-202ENST00000535789 NGBQ9NPG2 151 aa14.33□□□□□ -0.12
ATL3-202ENST00000535789 MEPEQ9NQ76 525 aaPredicted RBP14.33□□□□□ -0.12
ATL3-202ENST00000535789 ZNF701Q9NV72 531 aaPredicted RBP14.33□□□□□ -0.12
ATL3-202ENST00000535789 LAMP3Q9UQV4 416 aa14.33□□□□□ -0.12
ATL3-202ENST00000535789 LOC102725191A0A1B0GVB3 256 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 TRAPPC13A5PLN9 417 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 M0R1B8 84 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 KPNA4O00629 521 aaPredicted RBP14.32□□□□□ -0.12
ATL3-202ENST00000535789 ZNF43P17038 809 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 KDELR2P33947 212 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 OR1E2P47887 323 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 UGT2B15P54855 530 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 CDH11P55287 796 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 TUBA1BP68363 451 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 TUBA4AP68366 448 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 POU3F1Q03052 451 aaPredicted RBP14.32□□□□□ -0.12
ATL3-202ENST00000535789 ZNF74Q16587 644 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 TBRG1Q3YBR2 411 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 LRRC23Q53EV4 343 aaPredicted RBP14.32□□□□□ -0.12
ATL3-202ENST00000535789 CYBRD1Q53TN4 286 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 TUBA1AQ71U36 451 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 MYPOPQ86VE0 399 aaPredicted RBP14.32□□□□□ -0.12
ATL3-202ENST00000535789 NKAIN4Q8IVV8 208 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 LRRC17Q8N6Y2 441 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 SCAIQ8N9R8 606 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 SLC26A7Q8TE54 656 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 BCL2L2Q92843 193 aaPredicted RBP14.32□□□□□ -0.12
ATL3-202ENST00000535789 TXNDC15Q96J42 360 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 NSMCE2Q96MF7 247 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 EPYCQ99645 322 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 SMR3AQ99954 134 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 EMC6Q9BV81 110 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 TRIM15Q9C019 465 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 MED29Q9NX70 200 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 MRPL39Q9NYK5 338 aaKnown RBP14.32□□□□□ -0.12
ATL3-202ENST00000535789 AMDHD2Q9Y303 409 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 SH3GLB1Q9Y371 365 aa14.32□□□□□ -0.12
ATL3-202ENST00000535789 TCRBV3S1A0A5B6 114 aa14.31□□□□□ -0.12
ATL3-202ENST00000535789 AQP12BA6NM10 295 aa14.31□□□□□ -0.12
ATL3-202ENST00000535789 E7EQL1 145 aa14.31□□□□□ -0.12
ATL3-202ENST00000535789 ZNF587BE7ETH6 402 aa14.31□□□□□ -0.12
ATL3-202ENST00000535789 PLPP3O14495 311 aa14.31□□□□□ -0.12
ATL3-202ENST00000535789 CDKN1AP38936 164 aa14.31□□□□□ -0.12
ATL3-202ENST00000535789 ROR2Q01974 943 aaKnown RBP14.31□□□□□ -0.12
ATL3-202ENST00000535789 MTX3Q5HYI7 312 aa14.31□□□□□ -0.12
ATL3-202ENST00000535789 SHEQ5VZ18 495 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms