RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 YIF1BQ5BJH7 314 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 SFRP5Q5T4F7 317 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 RSBN1Q5VWQ0 802 aaPredicted RBP7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 XAF1Q6GPH4 301 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 HMBOX1Q6NT76 420 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF767PQ75MW2 155 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 GABRG1Q8N1C3 465 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 PAPD5Q8NDF8 572 aaKnown RBP7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 FAM71CQ8NEG0 241 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 OR6F1Q8NGZ6 308 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 SLC25A43Q8WUT9 341 aaPredicted RBP7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 OIT3Q8WWZ8 545 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF775Q96BV0 537 aaPredicted RBP7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 RCN3Q96D15 328 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 ZG16BQ96DA0 208 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 PERPQ96FX8 193 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF300Q96RE9 604 aaPredicted RBP7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 SAP130Q9H0E3 1048 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 OR10A4Q9H209 315 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 BCO1Q9HAY6 547 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 GP6Q9HCN6 339 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 C12orf4Q9NQ89 552 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 CTPS2Q9NRF8 586 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 PRSS50Q9UI38 385 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 CAB39Q9Y376 341 aaPredicted RBP7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 SNX13Q9Y5W8 968 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 GPR45Q9Y5Y3 372 aa7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 SPIN1Q9Y657 262 aaPredicted RBP7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF469Q96JG9 3925 aaPredicted RBP7.58□□□□□ -1.2
SFSWAP-202ENST00000535202 C2CD3Q4AC94 2353 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 FREM1Q5H8C1 2179 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 SULT2B1O00204 365 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 SOCS2O14508 198 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 RFXANKO14593 260 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 AP3D1O14617 1153 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 CYTIPO60759 359 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 APOA1P02647 267 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 NR2F1P10589 423 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 BMP4P12644 408 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 APOBEC1P41238 236 aaKnown RBP7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 OR3A2P47893 321 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 IDH2P48735 452 aaKnown RBP7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 ATP4BP51164 291 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 PLAURQ03405 335 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 LRRC74AQ0VAA2 488 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 FADDQ13158 208 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 CAPRIN1Q14444 709 aaKnown RBP7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 CTF1Q16619 201 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 ZFP69Q49AA0 526 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 SLC9B1Q4ZJI4 515 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 ESCO2Q56NI9 601 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 COX20Q5RI15 118 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 C8orf82Q6P1X6 216 aaPredicted RBP7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 SLC16A12Q6ZSM3 486 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 TMPPEQ6ZT21 453 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 BHLHA15Q7RTS1 189 aaPredicted RBP7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 GRINAQ7Z429 371 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 KCTD20Q7Z5Y7 419 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 LSRQ86X29 649 aaPredicted RBP7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 DHFR2Q86XF0 187 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 LRRC75A-AS1Q8N1F1 130 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 CBR4Q8N4T8 237 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 GLB1L3Q8NCI6 653 aaPredicted RBP7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 LHFPL5Q8TAF8 219 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 SETD6Q8TBK2 473 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 CNOT9Q92600 299 aaKnown RBP7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 KISS1RQ969F8 398 aaPredicted RBP7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 ZHX1-C8orf76Q96EF9 292 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 C18orf12Q96KH6 178 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 Q96MF0 132 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 TRNT1Q96Q11 434 aaKnown RBP7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 SMR3AQ99954 134 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 UQCC2Q9BRT2 126 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 CHID1Q9BWS9 393 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 HDHD5Q9BXW7 423 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 NAA50Q9GZZ1 169 aaKnown RBP7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 SLC38A1Q9H2H9 487 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 MMP27Q9H306 513 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 SPAG4Q9NPE6 437 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 EXOSC3Q9NQT5 275 aaKnown RBP7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 CHRNA9Q9UGM1 479 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 ING1Q9UK53 422 aaPredicted RBP7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 LIPT1Q9Y234 373 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 ITPR3Q14573 2671 aa7.57□□□□□ -1.2
SFSWAP-202ENST00000535202 TMED7-TICAM2A0A0A6YYA0 188 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 AGAP5A6NIR3 686 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF724A8MTY0 619 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 BBIP1A8MTZ0 92 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF814B7Z6K7 855 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 M0R3G1 203 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 CCRL2O00421 344 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 HS3ST1O14792 307 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 TMCC2O75069 709 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 ADAM11O75078 769 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 SLC22A3O75751 556 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 LYZL6O75951 148 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 IL6P05231 212 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 HSD17B1P14061 328 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 IL7RP16871 459 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms