RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.5■□□□□ 0.39
CHEK1-215ENST00000533778 HIF3AQ9Y2N7 669 aa17.5■□□□□ 0.39
CHEK1-215ENST00000533778 CIB4A0PJX0 185 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 ZNF587BE7ETH6 402 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 TNFRSF11BO00300 401 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 SERPINI2O75830 405 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 CIB2O75838 187 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 GOSR1O95249 250 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 TSPAN19P0C672 248 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 IFNGR1P15260 489 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 MPGP29372 298 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 DNAJA1P31689 397 aaKnown RBP17.49■□□□□ 0.39
CHEK1-215ENST00000533778 CCKARP32238 428 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 AQP2P41181 271 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 PRPS1P60891 318 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 GK3PQ14409 553 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 DAZAP2Q15038 168 aaPredicted RBP17.49■□□□□ 0.39
CHEK1-215ENST00000533778 C1orf146Q5VVC0 180 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 OR7E24Q6IFN5 339 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 NHLRC1Q6VVB1 395 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 SLC35D2Q76EJ3 337 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 HDDC2Q7Z4H3 204 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 CANT1Q8WVQ1 401 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 LRR1Q96L50 414 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 WFIKKN1Q96NZ8 548 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 OR2M2Q96R28 347 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 FUZQ9BT04 418 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 REEP1Q9H902 201 aa17.49■□□□□ 0.39
CHEK1-215ENST00000533778 STX18Q9P2W9 335 aaKnown RBP17.49■□□□□ 0.39
CHEK1-215ENST00000533778 PTPN13Q12923 2485 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 CACNA1CQ13936 2221 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 TCRBV3S1A0A5B6 114 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 SLC35F4A4IF30 521 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 OR10H3O60404 316 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 LYZL6O75951 148 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 BCL10O95999 233 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 GPR4P46093 362 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 OMPP47874 163 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 DAP3P51398 398 aaKnown RBP17.48■□□□□ 0.39
CHEK1-215ENST00000533778 SEC23BQ15437 767 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 ALG10Q5BKT4 473 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 ANKRD34AQ69YU3 496 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 OR2T5Q6IEZ7 315 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 P2RY8Q86VZ1 359 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 GPR137CQ8N3F9 429 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 ZNF433Q8N7K0 673 aaPredicted RBP17.48■□□□□ 0.39
CHEK1-215ENST00000533778 OR2T29Q8NH02 315 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 OR51A7Q8NH64 312 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 OR6X1Q8NH79 312 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 HSD17B8Q92506 261 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 S100PBPQ96BU1 408 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 FAM46AQ96IP4 442 aaKnown RBP17.48■□□□□ 0.39
CHEK1-215ENST00000533778 RSRC1Q96IZ7 334 aaKnown RBP17.48■□□□□ 0.39
CHEK1-215ENST00000533778 TXNDC15Q96J42 360 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 B3GAT2Q9NPZ5 323 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 MED29Q9NX70 200 aa17.48■□□□□ 0.39
CHEK1-215ENST00000533778 NPIPB13A6NJU9 1138 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 NPIPB4C9JG80 1138 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 PDLIM1O00151 329 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 CLOCKO15516 846 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 UPK3AO75631 287 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 F13BP05160 661 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 BIDP55957 195 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 RPS4XP62701 263 aaKnown RBP17.47■□□□□ 0.39
CHEK1-215ENST00000533778 LAPTM4AQ15012 233 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 ZBED5Q49AG3 693 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 C1QTNF12Q5T7M4 302 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 HMBOX1Q6NT76 420 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 C20orf196Q8IYI0 205 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 TMEM123Q8N131 208 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 C1orf162Q8NEQ5 155 aaPredicted RBP17.47■□□□□ 0.39
CHEK1-215ENST00000533778 EMC6Q9BV81 110 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 LYVE1Q9Y5Y7 322 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 HECTD1Q9ULT8 2610 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 HCFC1P51610 2035 aa17.47■□□□□ 0.39
CHEK1-215ENST00000533778 ASH1LQ9NR48 2969 aaKnown RBP17.46■□□□□ 0.39
CHEK1-215ENST00000533778 MCIDASD6RGH6 385 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 RPL36A-HNRNPH2H7BZ11 118 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 GNGT2O14610 69 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 CST1P01037 141 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 LIMS1P48059 325 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 TSC22D1Q15714 1073 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 TIMM23BQ5SRD1 257 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 CARD17Q5XLA6 110 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 MEX3DQ86XN8 651 aaKnown RBP17.46■□□□□ 0.39
CHEK1-215ENST00000533778 ZNF295-AS1Q8N0V1 137 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 C17orf78Q8N4C9 275 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 OR13C2Q8NGS9 318 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 OR6N1Q8NGY5 312 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 MOSPD2Q8NHP6 518 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 ZNF566Q969W8 418 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 MUCL1Q96DR8 90 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 SLC25A44Q96H78 314 aaPredicted RBP17.46■□□□□ 0.39
CHEK1-215ENST00000533778 MUS81Q96NY9 551 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 TNFRSF13CQ96RJ3 184 aa17.46■□□□□ 0.39
CHEK1-215ENST00000533778 CCM2LQ9NUG4 571 aaPredicted RBP17.46■□□□□ 0.39
CHEK1-215ENST00000533778 SAMHD1Q9Y3Z3 626 aaKnown RBP17.46■□□□□ 0.39
CHEK1-215ENST00000533778 UTP20O75691 2785 aaKnown RBP17.45■□□□□ 0.38
CHEK1-215ENST00000533778 ADGRG4Q8IZF6 3080 aa17.45■□□□□ 0.38
CHEK1-215ENST00000533778 TRAV27A0A087WT01 109 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms