RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 HRASLSQ9HDD0 168 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 PAQR5Q9NXK6 330 aaPredicted RBP5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 CCDC187A0A096LP49 1063 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 ACOD1A6NK06 481 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 RFPL3O75679 317 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 TFP02787 698 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 LIPCP11150 499 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 IL3RAP26951 378 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 APOBEC1P41238 236 aaKnown RBP5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 LUMP51884 338 aaPredicted RBP5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 AGFG1P52594 562 aaKnown RBP5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 GLYR1Q49A26 553 aaPredicted RBP5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 AADACL3Q5VUY0 350 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 TMEM71Q6P5X7 295 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 SYT13Q7L8C5 426 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 B3GNT8Q7Z7M8 397 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 RETREG3Q86VR2 466 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 EXD3Q8N9H8 876 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 GJC3Q8NFK1 279 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 NOX4Q9NPH5 578 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 DUSP22Q9NRW4 184 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 HIF1ANQ9NWT6 349 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 PROCRQ9UNN8 238 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 SNX11Q9Y5W9 270 aa5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 MYH9P35579 1960 aaKnown RBP5.89□□□□□ -1.47
UBQLN1-206ENST00000533705 UBFD1O14562 309 aaKnown RBP5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 ARPC5O15511 151 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 P2RX6O15547 441 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 NDUFB7P17568 137 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 CD22P20273 847 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 RFC3P40938 356 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 NR4A2P43354 598 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 VEGFCP49767 419 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 FOXK2Q01167 660 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 EDDM3AQ14507 147 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 TBCEQ15813 527 aaPredicted RBP5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 TRMT12Q53H54 448 aaKnown RBP5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 COX20Q5RI15 118 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 FAM198BQ6UWH4 519 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 B3GLCTQ6Y288 498 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 ZNF836Q6ZNA1 936 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 PGAP1Q75T13 922 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 FCRLAQ7L513 359 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 CPEB2Q7Z5Q1 589 aaKnown RBP5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 LILRA2Q8N149 483 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 KCNG3Q8TAE7 436 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 TMEM255BQ8WV15 326 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 LIPHQ8WWY8 451 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 MUL1Q969V5 352 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 C7orf50Q9BRJ6 194 aaKnown RBP5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 PPIL3Q9H2H8 161 aaKnown RBP5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 LIN7BQ9HAP6 207 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 MRPS28Q9Y2Q9 187 aaKnown RBP5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 MYH3P11055 1940 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 MYH7P12883 1935 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 CCDC163A0A0D9SF12 145 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 A0A1W2PPV4 95 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 ZNF732B4DXR9 585 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 VAMP5O95183 116 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 PGFP49763 221 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 GFERP55789 205 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 CLDN6P56747 220 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 CCL7P80098 99 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 DUSP2Q05923 314 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 GAB1Q13480 694 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 OR52W1Q6IF63 320 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 GFRALQ6UXV0 394 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 OLIG3Q7RTU3 272 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 OR6T1Q8NGN1 323 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 ZBTB8AQ96BR9 441 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 FKRPQ9H9S5 495 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 CRLF2Q9HC73 371 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 NDRG4Q9ULP0 352 aaKnown RBP5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 PMS2P1A4D2B8 440 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 A6NIN4 97 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 H0YIG0 161 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 P2RY10O00398 339 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 GABRPO00591 440 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 HPGDSO60760 199 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 KCNK2O95069 426 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 ZNF14P17017 642 aaPredicted RBP5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 SDHBP21912 280 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 NFYBP25208 207 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 KIR2DL3P43628 341 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 NXNL2Q5VZ03 156 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 Q6ZPB1 254 aaPredicted RBP5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 LRRC28Q86X40 367 aaPredicted RBP5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 KMT5CQ86Y97 462 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 BPIFB2Q8N4F0 458 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 TMEM106AQ96A25 262 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 RAB3CQ96E17 227 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 MVB12AQ96EY5 273 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 COQ10AQ96MF6 247 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 UBL7Q96S82 380 aaPredicted RBP5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 NKX3-1Q99801 234 aaPredicted RBP5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 SELENOIQ9C0D9 397 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 SLC25A31Q9H0C2 315 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 TMEM38AQ9H6F2 299 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 LUZP4Q9P127 313 aa5.88□□□□□ -1.47
UBQLN1-206ENST00000533705 WNT16Q9UBV4 365 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms