RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 PXKQ7Z7A4 578 aa12.74□□□□□ -0.37
COL16A1-217ENST00000532877 UEVLDQ8IX04 471 aa12.74□□□□□ -0.37
COL16A1-217ENST00000532877 OR2T33Q8NG76 320 aa12.74□□□□□ -0.37
COL16A1-217ENST00000532877 OR9K2Q8NGE7 335 aa12.74□□□□□ -0.37
COL16A1-217ENST00000532877 OR4Q3Q8NH05 313 aa12.74□□□□□ -0.37
COL16A1-217ENST00000532877 OXGR1Q96P68 337 aa12.74□□□□□ -0.37
COL16A1-217ENST00000532877 ADI1Q9BV57 179 aa12.74□□□□□ -0.37
COL16A1-217ENST00000532877 KATNB1Q9BVA0 655 aa12.74□□□□□ -0.37
COL16A1-217ENST00000532877 POLDIP3Q9BY77 421 aaKnown RBP12.74□□□□□ -0.37
COL16A1-217ENST00000532877 PRRG4Q9BZD6 226 aa12.74□□□□□ -0.37
COL16A1-217ENST00000532877 GRIP2Q9C0E4 1043 aa12.74□□□□□ -0.37
COL16A1-217ENST00000532877 SLC25A19Q9HC21 320 aa12.74□□□□□ -0.37
COL16A1-217ENST00000532877 NRIP3Q9NQ35 241 aa12.74□□□□□ -0.37
COL16A1-217ENST00000532877 ADAM18Q9Y3Q7 739 aa12.74□□□□□ -0.37
COL16A1-217ENST00000532877 NOX1Q9Y5S8 564 aa12.74□□□□□ -0.37
COL16A1-217ENST00000532877 CSMD1Q96PZ7 3565 aa12.74□□□□□ -0.37
COL16A1-217ENST00000532877 POLEQ07864 2286 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 MED12LQ86YW9 2145 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 DOCK7Q96N67 2140 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 ARHGAP21Q5T5U3 1957 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 A0A1W2PRG6 482 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 IGHMP01871 453 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 ZNF43P17038 809 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 ACVR2AP27037 513 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 GIPRP48546 466 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 SLC16A1P53985 500 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 ERVK-25P63136 954 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 CDK5Q00535 292 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 RASGEF1BQ0VAM2 473 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 TOP3AQ13472 1001 aaPredicted RBP12.73□□□□□ -0.37
COL16A1-217ENST00000532877 GINS1Q14691 196 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 SF3B4Q15427 424 aaKnown RBP eCLIP12.73□□□□□ -0.37
COL16A1-217ENST00000532877 PGGHGQ32M88 737 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 C1orf185Q5T7R7 199 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 SLX4IPQ5VYV7 408 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 TMEM236Q5W0B7 351 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 NSUN5P2Q63ZY6 315 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 RTL6Q6ICC9 239 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 SLC27A4Q6P1M0 643 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 NHLRC1Q6VVB1 395 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 RPTNQ6XPR3 784 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 FAM122BQ7Z309 247 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 P4HA3Q7Z4N8 544 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 LNX2Q8N448 690 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 CYGBQ8WWM9 190 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 TSPAN32Q96QS1 320 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 ZNF184Q99676 751 aaPredicted RBP12.73□□□□□ -0.37
COL16A1-217ENST00000532877 PITX2Q99697 317 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 SF3B5Q9BWJ5 86 aaKnown RBP12.73□□□□□ -0.37
COL16A1-217ENST00000532877 TP63Q9H3D4 680 aaPredicted RBP12.73□□□□□ -0.37
COL16A1-217ENST00000532877 RNF122Q9H9V4 155 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 CALHM2Q9HA72 323 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 FAM118AQ9NWS6 357 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 KLHL9Q9P2J3 617 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 TINAGQ9UJW2 476 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 ING1Q9UK53 422 aaPredicted RBP12.73□□□□□ -0.37
COL16A1-217ENST00000532877 FAM215AQ9Y5M1 114 aa12.73□□□□□ -0.37
COL16A1-217ENST00000532877 C2CD3Q4AC94 2353 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 ALPK2Q86TB3 2170 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 IGKV3D-15A0A087WSY6 115 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 TEX13CA0A0J9YWL9 993 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 NPIPB13A6NJU9 1138 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 CD8B2A6NJW9 211 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 NPIPB4C9JG80 1138 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 IFNGR1P15260 489 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 CAPGP40121 348 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 HSPA13P48723 471 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 RPS6KA3P51812 740 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 SMSP52788 366 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 C1DQ13901 141 aaKnown RBP12.72□□□□□ -0.37
COL16A1-217ENST00000532877 MELKQ14680 651 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 PDK3Q15120 406 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 RNPS1Q15287 305 aaKnown RBP12.72□□□□□ -0.37
COL16A1-217ENST00000532877 ACKR1Q16570 336 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 EEF1A1P5Q5VTE0 462 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 ACSM5Q6NUN0 579 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 C3P1Q6ZMU1 363 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 CREB3L2Q70SY1 520 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 SLC35D2Q76EJ3 337 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 DOLPP1Q86YN1 238 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 DHRSXQ8N5I4 330 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 C9orf106Q8NAJ2 232 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 WNT2BQ93097 391 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 HRASLS5Q96KN8 279 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 ERMAPQ96PL5 475 aaPredicted RBP12.72□□□□□ -0.37
COL16A1-217ENST00000532877 TXNIPQ9H3M7 391 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 MED29Q9NX70 200 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 NDRG4Q9ULP0 352 aaKnown RBP12.72□□□□□ -0.37
COL16A1-217ENST00000532877 BAIAP2Q9UQB8 552 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 IER3IP1Q9Y5U9 82 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 FLVCR1Q9Y5Y0 555 aa12.72□□□□□ -0.37
COL16A1-217ENST00000532877 ESPL1Q14674 2120 aa12.71□□□□□ -0.37
COL16A1-217ENST00000532877 LOC100130705A0A1B0GUX0 176 aa12.71□□□□□ -0.37
COL16A1-217ENST00000532877 MBD3L4A6NDZ8 208 aaPredicted RBP12.71□□□□□ -0.37
COL16A1-217ENST00000532877 MBD3L3A6NE82 208 aaPredicted RBP12.71□□□□□ -0.37
COL16A1-217ENST00000532877 MBD3L5A6NJ08 208 aaPredicted RBP12.71□□□□□ -0.37
COL16A1-217ENST00000532877 ARPC3O15145 178 aa12.71□□□□□ -0.37
COL16A1-217ENST00000532877 SLC16A6O15403 523 aa12.71□□□□□ -0.37
COL16A1-217ENST00000532877 TXNDC12O95881 172 aa12.71□□□□□ -0.37
COL16A1-217ENST00000532877 HOXD4P09016 255 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms