RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 TFPIP10646 304 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 CRHBPP24387 322 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 POLR2HP52434 150 aaKnown RBP8.37□□□□□ -1.07
VPS26B-207ENST00000532160 SUCLG1P53597 346 aaKnown RBP8.37□□□□□ -1.07
VPS26B-207ENST00000532160 CLDN18P56856 261 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 NKX6-1P78426 367 aaPredicted RBP8.37□□□□□ -1.07
VPS26B-207ENST00000532160 TMEM176BQ3YBM2 270 aaPredicted RBP8.37□□□□□ -1.07
VPS26B-207ENST00000532160 IQCCQ4KMZ1 466 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 SLC25A53Q5H9E4 307 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 OTUD3Q5T2D3 398 aaPredicted RBP8.37□□□□□ -1.07
VPS26B-207ENST00000532160 OR2T5Q6IEZ7 315 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 CLEC9AQ6UXN8 241 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 WDR88Q6ZMY6 472 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 KCTD8Q6ZWB6 473 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 ATG4DQ86TL0 474 aaPredicted RBP8.37□□□□□ -1.07
VPS26B-207ENST00000532160 NKAIN4Q8IVV8 208 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 CIARTQ8N365 385 aaPredicted RBP8.37□□□□□ -1.07
VPS26B-207ENST00000532160 LSMEM1Q8N8F7 131 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 PIK3C3Q8NEB9 887 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 OR13F1Q8NGS4 319 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 OR2T29Q8NH02 315 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 FCGR1BQ92637 280 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 WNT2BQ93097 391 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 SLC35B4Q969S0 331 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 SLC41A3Q96GZ6 507 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 MRGPRX4Q96LA9 322 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 ZNF300Q96RE9 604 aaPredicted RBP8.37□□□□□ -1.07
VPS26B-207ENST00000532160 TM9SF2Q99805 663 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 TRIM2Q9C040 744 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 ADAM19Q9H013 955 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 NDUFAF4Q9P032 175 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 SLC7A7Q9UM01 511 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 MRPS18CQ9Y3D5 142 aaKnown RBP8.37□□□□□ -1.07
VPS26B-207ENST00000532160 TESMINQ9Y4I5 508 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 ENPP4Q9Y6X5 453 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 ANK3Q12955 4377 aaKnown RBP8.37□□□□□ -1.07
VPS26B-207ENST00000532160 RTTNQ86VV8 2226 aa8.37□□□□□ -1.07
VPS26B-207ENST00000532160 A0A0J9YW62 118 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 SH3PXD2BA1X283 911 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 TRAPPC13A5PLN9 417 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 ELOA3DA6NLF2 546 aaPredicted RBP8.36□□□□□ -1.07
VPS26B-207ENST00000532160 DEFB108AA8MXU0 73 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 ETV2O00321 342 aaPredicted RBP8.36□□□□□ -1.07
VPS26B-207ENST00000532160 KPNA4O00629 521 aaPredicted RBP8.36□□□□□ -1.07
VPS26B-207ENST00000532160 EIF1AYO14602 144 aaKnown RBP8.36□□□□□ -1.07
VPS26B-207ENST00000532160 TNFSF11O14788 317 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 ADAMDEC1O15204 470 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 FMO6PO60774 539 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 LYPD3O95274 346 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 FABP3P05413 133 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 HEXAP06865 529 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 ZNF17P17021 662 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 CBLP22681 906 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 CHMP24386 653 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 CXCR1P25024 350 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 CCKARP32238 428 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 APOBEC1P41238 236 aaKnown RBP8.36□□□□□ -1.07
VPS26B-207ENST00000532160 EIF1P41567 113 aaKnown RBP8.36□□□□□ -1.07
VPS26B-207ENST00000532160 SERPINB10P48595 397 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 CLDN15P56746 228 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 RAC1P63000 192 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 FAM27E3Q08E93 113 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 PPP1R8Q12972 351 aaKnown RBP8.36□□□□□ -1.07
VPS26B-207ENST00000532160 SELENBP1Q13228 472 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 RAB39AQ14964 217 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 ELOA3BQ3SY89 546 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 GLYR1Q49A26 553 aaPredicted RBP8.36□□□□□ -1.07
VPS26B-207ENST00000532160 Q5PR19 223 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 ZNF691Q5VV52 312 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 SHEQ5VZ18 495 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 VWA1Q6PCB0 445 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 ULK3Q6PHR2 472 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 GGNQ86UU5 652 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 ZDHHC21Q8IVQ6 265 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 DRAXINQ8NBI3 349 aaPredicted RBP8.36□□□□□ -1.07
VPS26B-207ENST00000532160 ELOA3Q8NG57 546 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 OR52J3Q8NH60 311 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 FBLIM1Q8WUP2 373 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 S100ZQ8WXG8 99 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 C12orf43Q96C57 262 aaKnown RBP8.36□□□□□ -1.07
VPS26B-207ENST00000532160 STARD4Q96DR4 205 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 ZNF845Q96IR2 970 aaPredicted RBP8.36□□□□□ -1.07
VPS26B-207ENST00000532160 ARL5BQ96KC2 179 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 PRRC1Q96M27 445 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 MUS81Q96NY9 551 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 WFIKKN1Q96NZ8 548 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 PIGMQ9H3S5 423 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 TOR3AQ9H497 397 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 REEP1Q9H902 201 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 SERINC1Q9NRX5 453 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 CHRNA9Q9UGM1 479 aa8.36□□□□□ -1.07
VPS26B-207ENST00000532160 SONP18583 2426 aaKnown RBP8.36□□□□□ -1.07
VPS26B-207ENST00000532160 RAI1Q7Z5J4 1906 aaPredicted RBP8.36□□□□□ -1.07
VPS26B-207ENST00000532160 ATRQ13535 2644 aa8.35□□□□□ -1.07
VPS26B-207ENST00000532160 FBN3Q75N90 2809 aa8.35□□□□□ -1.07
VPS26B-207ENST00000532160 IGKV1D-42A0A075B6H8 117 aa8.35□□□□□ -1.07
VPS26B-207ENST00000532160 LRRN3E7EW58 273 aa8.35□□□□□ -1.07
VPS26B-207ENST00000532160 CASKO14936 926 aa8.35□□□□□ -1.07
VPS26B-207ENST00000532160 SLC22A1O15245 554 aa8.35□□□□□ -1.07
VPS26B-207ENST00000532160 CHP2O43745 196 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms