RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 ARFIP2P53365 341 aa19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 LSM11P83369 360 aaKnown RBP eCLIP19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 PMS2P3Q13401 168 aa19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 CARTPTQ16568 116 aa19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 MS4A18Q3C1V0 323 aa19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 RUNDC3AQ59EK9 446 aa19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 CARD17Q5XLA6 110 aa19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 TMEM123Q8N131 208 aa19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 SCAIQ8N9R8 606 aa19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 C11orf65Q8NCR3 313 aa19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 SPATA3Q8NHX4 192 aa19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 ZNF837Q96EG3 531 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 CPPED1Q9BRF8 314 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 PIMREGQ9BSJ6 248 aa19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 B3GAT2Q9NPZ5 323 aa19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 CDC42EP3Q9UKI2 254 aa19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 NDUFAF1Q9Y375 327 aa19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 SONP18583 2426 aaKnown RBP19.35■□□□□ 0.69
TRAPPC4-210ENST00000531290 ALPK2Q86TB3 2170 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 ZNF726A6NNF4 738 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 ZNF99A8MXY4 864 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 MFN2O95140 757 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 CALCRP30988 508 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 MDH1P40925 334 aaKnown RBP19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 CDH12P55289 794 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 NPRL3Q12980 569 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 EFNB3Q15768 340 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 CYP51A1Q16850 503 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 SWT1Q5T5J6 900 aaKnown RBP19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 C20orf196Q8IYI0 205 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 SMYD1Q8NB12 490 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 NUP37Q8NFH4 326 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 IL17RDQ8NFM7 739 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 SLC41A3Q96GZ6 507 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 EMC6Q9BV81 110 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 SEC61A2Q9H9S3 476 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 MYOZ1Q9NP98 299 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 USP22Q9UPT9 525 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 NOX1Q9Y5S8 564 aa19.34■□□□□ 0.69
TRAPPC4-210ENST00000531290 PLCE1Q9P212 2302 aa19.33■□□□□ 0.69
TRAPPC4-210ENST00000531290 TPST2O60704 377 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 HPRP00739 348 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 BGLAPP02818 100 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 CELA3BP08861 270 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 HLA-DOBP13765 273 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 POU3F1Q03052 451 aaPredicted RBP19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 HGFACQ04756 655 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 RBBP4Q09028 425 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 GGTLC2Q14390 218 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 DHDDSQ86SQ9 333 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 MDP1Q86V88 176 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 ANKS4BQ8N8V4 417 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 TSPEARQ8WU66 669 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 LRR1Q96L50 414 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 ANKRD27Q96NW4 1050 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 MCHR1Q99705 422 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 WFDC6Q9BQY6 131 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 TMEM43Q9BTV4 400 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 BEX2Q9BXY8 128 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 RAB1BQ9H0U4 201 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 PLK3Q9H4B4 646 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 CCDC134Q9H6E4 229 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 MRPL39Q9NYK5 338 aaKnown RBP19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 POFUT2Q9Y2G5 429 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 ABCA1O95477 2261 aa19.33■□□□□ 0.68
TRAPPC4-210ENST00000531290 LOC390937A0A1W2PQ73 354 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 SLC35F4A4IF30 521 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 M0QX08 132 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 SEC14L2O76054 403 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 ERCC1P07992 297 aaPredicted RBP19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 IGHV4-31P0DP07 118 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 NPR2P20594 1047 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 AHCYP23526 432 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 THBS4P35443 961 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 NR4A2P43354 598 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 GZMKP49863 264 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 PUDPQ08623 228 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 PHYHD1Q5SRE7 291 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 SNX32Q86XE0 403 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 ZNF540Q8NDQ6 660 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 OR6N1Q8NGY5 312 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 TXNDC15Q96J42 360 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 FOXN4Q96NZ1 517 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 MOGAT1Q96PD6 335 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 ZNF442Q9H7R0 627 aa19.32■□□□□ 0.68
TRAPPC4-210ENST00000531290 FBN1P35555 2871 aaKnown RBP19.31■□□□□ 0.68
TRAPPC4-210ENST00000531290 hCG_2039718K7EN88 272 aa19.31■□□□□ 0.68
TRAPPC4-210ENST00000531290 M0R3H8 397 aa19.31■□□□□ 0.68
TRAPPC4-210ENST00000531290 FMO6PO60774 539 aa19.31■□□□□ 0.68
TRAPPC4-210ENST00000531290 OR6A2O95222 327 aa19.31■□□□□ 0.68
TRAPPC4-210ENST00000531290 MT-ATP6P00846 226 aa19.31■□□□□ 0.68
TRAPPC4-210ENST00000531290 FAM157CP0CG43 387 aa19.31■□□□□ 0.68
TRAPPC4-210ENST00000531290 PPOXP50336 477 aa19.31■□□□□ 0.68
TRAPPC4-210ENST00000531290 ZNF613Q6PF04 617 aa19.31■□□□□ 0.68
TRAPPC4-210ENST00000531290 PXKQ7Z7A4 578 aa19.31■□□□□ 0.68
TRAPPC4-210ENST00000531290 PTOV1Q86YD1 416 aa19.31■□□□□ 0.68
TRAPPC4-210ENST00000531290 DPP10Q8N608 796 aa19.31■□□□□ 0.68
TRAPPC4-210ENST00000531290 CGREF1Q99674 301 aa19.31■□□□□ 0.68
TRAPPC4-210ENST00000531290 ZNF385DQ9H6B1 395 aa19.31■□□□□ 0.68
TRAPPC4-210ENST00000531290 TMEM160Q9NX00 188 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms