RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 B3GLCTQ6Y288 498 aa28.85■■■□□ 2.21
SSSCA1-205ENST00000527920 C20orf196Q8IYI0 205 aa28.85■■■□□ 2.21
SSSCA1-205ENST00000527920 MICU2Q8IYU8 434 aa28.85■■■□□ 2.21
SSSCA1-205ENST00000527920 PRSS27Q9BQR3 290 aa28.85■■■□□ 2.21
SSSCA1-205ENST00000527920 GSX1Q9H4S2 264 aaPredicted RBP28.85■■■□□ 2.21
SSSCA1-205ENST00000527920 CRLF2Q9HC73 371 aa28.85■■■□□ 2.21
SSSCA1-205ENST00000527920 ZNF229Q9UJW7 825 aa28.85■■■□□ 2.21
SSSCA1-205ENST00000527920 ELOVL7A1L3X0 281 aa28.84■■■□□ 2.21
SSSCA1-205ENST00000527920 H7C1Q1 480 aa28.84■■■□□ 2.21
SSSCA1-205ENST00000527920 OR5F1O95221 314 aa28.84■■■□□ 2.21
SSSCA1-205ENST00000527920 RBM34P42696 430 aaKnown RBP28.84■■■□□ 2.21
SSSCA1-205ENST00000527920 SPATA21Q7Z572 469 aa28.84■■■□□ 2.21
SSSCA1-205ENST00000527920 CCDC36Q8IYA8 594 aa28.84■■■□□ 2.21
SSSCA1-205ENST00000527920 SLC38A2Q96QD8 506 aa28.84■■■□□ 2.21
SSSCA1-205ENST00000527920 NANSQ9NR45 359 aa28.84■■■□□ 2.21
SSSCA1-205ENST00000527920 CMTM6Q9NX76 183 aa28.84■■■□□ 2.21
SSSCA1-205ENST00000527920 IGF2P01344 180 aa28.83■■■□□ 2.21
SSSCA1-205ENST00000527920 ARF1P84077 181 aaKnown RBP28.83■■■□□ 2.21
SSSCA1-205ENST00000527920 ZP4Q12836 540 aa28.83■■■□□ 2.21
SSSCA1-205ENST00000527920 CYBRD1Q53TN4 286 aa28.83■■■□□ 2.21
SSSCA1-205ENST00000527920 C11orf71Q6IPW1 123 aa28.83■■■□□ 2.21
SSSCA1-205ENST00000527920 FBXL14Q8N1E6 418 aa28.83■■■□□ 2.21
SSSCA1-205ENST00000527920 HOPXQ9BPY8 73 aaPredicted RBP28.83■■■□□ 2.21
SSSCA1-205ENST00000527920 KATNB1Q9BVA0 655 aa28.83■■■□□ 2.21
SSSCA1-205ENST00000527920 CBLN4Q9NTU7 201 aa28.83■■■□□ 2.21
SSSCA1-205ENST00000527920 MED29Q9NX70 200 aa28.83■■■□□ 2.21
SSSCA1-205ENST00000527920 SLC35F4A4IF30 521 aa28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 TRIM64A6NGJ6 449 aa28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 TRIM64BA6NI03 449 aa28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 ZNF99A8MXY4 864 aaPredicted RBP28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 CH25HO95992 272 aa28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 ADORA3P0DMS8 318 aa28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 THRBP10828 461 aa28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 AHCYP23526 432 aa28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 CDKN1AP38936 164 aa28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 CEACAM16Q2WEN9 425 aa28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 LRRC23Q53EV4 343 aaPredicted RBP28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 HACD2Q6Y1H2 254 aa28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 SLC15A3Q8IY34 581 aa28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 CIARTQ8N365 385 aaPredicted RBP28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 MUC15Q8N387 334 aa28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 EFCAB1Q9HAE3 211 aa28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 BARX1Q9HBU1 254 aaPredicted RBP28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 B3GAT2Q9NPZ5 323 aa28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 ALPK2Q86TB3 2170 aa28.82■■■□□ 2.2
SSSCA1-205ENST00000527920 A0A096LPE4 126 aa28.81■■■□□ 2.2
SSSCA1-205ENST00000527920 IGHV1-18A0A0C4DH31 117 aa28.81■■■□□ 2.2
SSSCA1-205ENST00000527920 A0A1W2PPZ6 126 aa28.81■■■□□ 2.2
SSSCA1-205ENST00000527920 OR6A2O95222 327 aa28.81■■■□□ 2.2
SSSCA1-205ENST00000527920 IGLV1-44P01699 117 aa28.81■■■□□ 2.2
SSSCA1-205ENST00000527920 ASAH2BP0C7U1 165 aa28.81■■■□□ 2.2
SSSCA1-205ENST00000527920 TAS2R41P59536 307 aa28.81■■■□□ 2.2
SSSCA1-205ENST00000527920 C8orf82Q6P1X6 216 aaPredicted RBP28.81■■■□□ 2.2
SSSCA1-205ENST00000527920 ZNF627Q7L945 461 aa28.81■■■□□ 2.2
SSSCA1-205ENST00000527920 TXNDC15Q96J42 360 aa28.81■■■□□ 2.2
SSSCA1-205ENST00000527920 EMC6Q9BV81 110 aa28.81■■■□□ 2.2
SSSCA1-205ENST00000527920 MEPEQ9NQ76 525 aaPredicted RBP28.81■■■□□ 2.2
SSSCA1-205ENST00000527920 ZNF726A6NNF4 738 aa28.8■■■□□ 2.2
SSSCA1-205ENST00000527920 IGKV3-15P01624 115 aa28.8■■■□□ 2.2
SSSCA1-205ENST00000527920 TNFRSF1BP20333 461 aa28.8■■■□□ 2.2
SSSCA1-205ENST00000527920 FABP6P51161 128 aa28.8■■■□□ 2.2
SSSCA1-205ENST00000527920 SELENOWP63302 87 aa28.8■■■□□ 2.2
SSSCA1-205ENST00000527920 DEF8Q6ZN54 512 aa28.8■■■□□ 2.2
SSSCA1-205ENST00000527920 TREML1Q86YW5 311 aa28.8■■■□□ 2.2
SSSCA1-205ENST00000527920 ZNF837Q96EG3 531 aaPredicted RBP28.8■■■□□ 2.2
SSSCA1-205ENST00000527920 ADAD1Q96M93 576 aaKnown RBP28.8■■■□□ 2.2
SSSCA1-205ENST00000527920 TAS2R5Q9NYW4 299 aa28.8■■■□□ 2.2
SSSCA1-205ENST00000527920 RIMS3Q9UJD0 308 aa28.8■■■□□ 2.2
SSSCA1-205ENST00000527920 ATP23Q9Y6H3 246 aa28.8■■■□□ 2.2
SSSCA1-205ENST00000527920 ATP6V1G2-DDX39BF2Z307 99 aa28.79■■■□□ 2.2
SSSCA1-205ENST00000527920 M0R3G1 203 aa28.79■■■□□ 2.2
SSSCA1-205ENST00000527920 KPNA4O00629 521 aaPredicted RBP28.79■■■□□ 2.2
SSSCA1-205ENST00000527920 NDUFAB1O14561 156 aa28.79■■■□□ 2.2
SSSCA1-205ENST00000527920 SLC46A3Q7Z3Q1 461 aa28.79■■■□□ 2.2
SSSCA1-205ENST00000527920 LZICQ8WZA0 190 aa28.79■■■□□ 2.2
SSSCA1-205ENST00000527920 SMR3AQ99954 134 aa28.79■■■□□ 2.2
SSSCA1-205ENST00000527920 ELAC2Q9BQ52 826 aaKnown RBP28.79■■■□□ 2.2
SSSCA1-205ENST00000527920 MYLK2Q9H1R3 596 aa28.79■■■□□ 2.2
SSSCA1-205ENST00000527920 MOKQ9UQ07 419 aa28.79■■■□□ 2.2
SSSCA1-205ENST00000527920 IGHV4-39P01824 125 aa28.78■■■□□ 2.2
SSSCA1-205ENST00000527920 MT-ND1P03886 318 aa28.78■■■□□ 2.2
SSSCA1-205ENST00000527920 HIST1H2ABP04908 130 aa28.78■■■□□ 2.2
SSSCA1-205ENST00000527920 CBR1P16152 277 aa28.78■■■□□ 2.2
SSSCA1-205ENST00000527920 OR1E2P47887 323 aa28.78■■■□□ 2.2
SSSCA1-205ENST00000527920 LIPEQ05469 1076 aa28.78■■■□□ 2.2
SSSCA1-205ENST00000527920 CLEC12BQ2HXU8 276 aa28.78■■■□□ 2.2
SSSCA1-205ENST00000527920 PHYHD1Q5SRE7 291 aa28.78■■■□□ 2.2
SSSCA1-205ENST00000527920 CARD17Q5XLA6 110 aa28.78■■■□□ 2.2
SSSCA1-205ENST00000527920 CLEC9AQ6UXN8 241 aa28.78■■■□□ 2.2
SSSCA1-205ENST00000527920 HIST3H2AQ7L7L0 130 aa28.78■■■□□ 2.2
SSSCA1-205ENST00000527920 OR6X1Q8NH79 312 aa28.78■■■□□ 2.2
SSSCA1-205ENST00000527920 HIST1H2ACQ93077 130 aa28.78■■■□□ 2.2
SSSCA1-205ENST00000527920 HS6ST2Q96MM7 605 aa28.78■■■□□ 2.2
SSSCA1-205ENST00000527920 KCNS3Q9BQ31 491 aa28.78■■■□□ 2.2
SSSCA1-205ENST00000527920 C11orf98E9PRG8 122 aa28.77■■■□□ 2.2
SSSCA1-205ENST00000527920 CRYAAP02489 173 aa28.77■■■□□ 2.2
SSSCA1-205ENST00000527920 IFNGR1P15260 489 aa28.77■■■□□ 2.2
SSSCA1-205ENST00000527920 APOBEC3AP31941 199 aaPredicted RBP28.77■■■□□ 2.2
SSSCA1-205ENST00000527920 SEC24CP53992 1094 aa28.77■■■□□ 2.2
SSSCA1-205ENST00000527920 PIN1Q13526 163 aaPredicted RBP28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms