RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	SLC38A9	Q8NBW4	561 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	ATP6V1C2	Q8NEY4	427 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	OR10H5	Q8NGA6	315 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	OR11G2	Q8NGC1	345 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	OR5M3	Q8NGP4	307 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	OR2I1P	Q8NGU4	316 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	MCFD2	Q8NI22	146 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	PAQR8	Q8TEZ7	354 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	THAP3	Q8WTV1	239 aa	Predicted RBP	5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	C15orf40	Q8WUR7	153 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	SMPDL3B	Q92485	455 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	TM9SF4	Q92544	642 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	TMIGD2	Q96BF3	282 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	INTS12	Q96CB8	462 aa	Known RBP	5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	C1GALT1C1	Q96EU7	318 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	IMMP1L	Q96LU5	166 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	DACH2	Q96NX9	599 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	SLX1A	Q9BQ83	275 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	UTP23	Q9BRU9	249 aa	Known RBP	5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	TTYH2	Q9BSA4	534 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	MED18	Q9BUE0	208 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	ALG12	Q9BV10	488 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	KATNB1	Q9BVA0	655 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	ALG8	Q9BVK2	526 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	ANGPTL4	Q9BY76	406 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	PLA2G12A	Q9BZM1	189 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	NRSN2	Q9GZP1	204 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	COMMD4	Q9H0A8	199 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	TXNIP	Q9H3M7	391 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	SP140L	Q9H930	580 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	MCCC2	Q9HCC0	563 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	ZNF160	Q9HCG1	818 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	CHST11	Q9NPF2	352 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	B3GAT2	Q9NPZ5	323 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	C20orf141	Q9NUB4	165 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	ERVK13-1	Q9NX77	482 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	LUZP4	Q9P127	313 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	LAMP5	Q9UJQ1	280 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	B3GNT3	Q9Y2A9	372 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	RPH3A	Q9Y2J0	694 aa	Predicted RBP	5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	GPR52	Q9Y2T5	361 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	HS3ST3B1	Q9Y662	390 aa		5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	NUP214	P35658	2090 aa	Predicted RBP	5.68	□□□□□ -1.5
PABPC4-222	ENST00000527718	TDRD6	O60522	2096 aa	Known RBP	5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718		A0A075B6Q4	140 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	TRDV1	A0A1B0GX56	115 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718		A0A1W2PNV4	684 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718		A0A1W2PPW3	197 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	ISPD	A4D126	451 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	OR2W5	A6NFC9	320 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	OR6C65	A6NJZ3	312 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	ZNF726	A6NNF4	738 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	C12orf71	A8MTZ7	269 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	KLRC4-KLRK1	H3BQV0	150 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	ACOT7	O00154	380 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	SOCS6	O14544	535 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	CDX4	O14627	284 aa	Predicted RBP	5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	ZNF254	O75437	659 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	KLF7	O75840	302 aa	Predicted RBP	5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	RGS9	O75916	674 aa	Predicted RBP	5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	TNFSF15	O95150	251 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	PMS2P2	O95744	297 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	IGHG1	P01857	330 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	HLA-DQA2	P01906	255 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	APOA1	P02647	267 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	THY1	P04216	161 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	LCK	P06239	509 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	CEACAM1	P13688	526 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	HIST1H1C	P16403	213 aa	Known RBP	5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	ZNF43	P17038	809 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	PTBP1	P26599	531 aa	Known RBP eCLIP	5.67	□□□□□ -1.5	1e-323	■□□□□ 9.6
PABPC4-222	ENST00000527718	DPP4	P27487	766 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	CD40LG	P29965	261 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	SRD5A2	P31213	254 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	FGF9	P31371	208 aa	Predicted RBP	5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	UQCRC1	P31930	480 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	SDC2	P34741	201 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	PLA2G5	P39877	138 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	RPS5	P46782	204 aa	Known RBP	5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	TGM4	P49221	684 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	RPS3A	P61247	264 aa	Known RBP	5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	ERVK-25	P63136	954 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	OC90	Q02509	493 aa	Predicted RBP	5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	RPL18	Q07020	188 aa	Known RBP	5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	SPEM2	Q0P670	501 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	DOC2B	Q14184	412 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	CRMP1	Q14194	572 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	SF3B4	Q15427	424 aa	Known RBP eCLIP	5.67	□□□□□ -1.5	2e-7	■■■■■ 29
PABPC4-222	ENST00000527718	CTF1	Q16619	201 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	ZNF791	Q3KP31	576 aa	Predicted RBP	5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	THEM4	Q5T1C6	240 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	DDI2	Q5TDH0	399 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	STPG1	Q5TH74	334 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	TMEM225	Q6GV28	225 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	LAIR2	Q6ISS4	152 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	SLC18B1	Q6NT16	456 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	DEGS2	Q6QHC5	323 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	CBLN3	Q6UW01	205 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	IL20RB	Q6UXL0	311 aa		5.67	□□□□□ -1.5
PABPC4-222	ENST00000527718	TRIL	Q7L0X0	811 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms