RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 KIR2DL4Q99706 377 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 SLC29A1Q99808 456 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 PYGO2Q9BRQ0 406 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 Q9H3A6 140 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 EHD1Q9H4M9 534 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 CWH43Q9H720 699 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 C8orf33Q9H7E9 229 aaPredicted RBP3.38□□□□□ -1.87
CSDE1-211ENST00000525970 MRPL22Q9NWU5 206 aaKnown RBP3.38□□□□□ -1.87
CSDE1-211ENST00000525970 B4GALT7Q9UBV7 327 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 CLN8Q9UBY8 286 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 RHBDD3Q9Y3P4 386 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 V9GY05 133 aa3.38□□□□□ -1.87
CSDE1-211ENST00000525970 NDUFAB1O14561 156 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 MRPS12O15235 138 aaKnown RBP3.37□□□□□ -1.87
CSDE1-211ENST00000525970 SPOPO43791 374 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 SOX15O60248 233 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 IGHV3-23P01764 117 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 ALDOBP05062 364 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 SERPINE2P07093 398 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 KLK3P07288 261 aaPredicted RBP3.37□□□□□ -1.87
CSDE1-211ENST00000525970 GIG44P09565 113 aaPredicted RBP3.37□□□□□ -1.87
CSDE1-211ENST00000525970 CAPN2P17655 700 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 CXCR2P25025 360 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 GDF1P27539 372 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 CD1BP29016 333 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 SHC1P29353 583 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 UGT1A3P35503 534 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 BTDP43251 543 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 NPBWR2P48146 333 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 CLDN18P56856 261 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 IFT88Q13099 833 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 PRR30Q53SZ7 412 aaPredicted RBP3.37□□□□□ -1.87
CSDE1-211ENST00000525970 XKR4Q5GH76 650 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 ARCQ7LC44 396 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 SLC26A11Q86WA9 606 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 MMAAQ8IVH4 418 aaKnown RBP3.37□□□□□ -1.87
CSDE1-211ENST00000525970 CADM2Q8N3J6 435 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 PDCL2Q8N4E4 241 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.37□□□□□ -1.87
CSDE1-211ENST00000525970 C8orf31Q8N9H6 132 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 ACOT4Q8N9L9 421 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 FNDC5Q8NAU1 212 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 KLHL30-AS1Q8NEE0 82 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 OR10G3Q8NGC4 313 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 OR9G4Q8NGQ1 327 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 ANKRD49Q8WVL7 239 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 SMARCD2Q92925 531 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 STMN2Q93045 179 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 TOP1MTQ969P6 601 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 SLC25A38Q96DW6 304 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 DUS3LQ96G46 650 aaKnown RBP3.37□□□□□ -1.87
CSDE1-211ENST00000525970 SIGLEC12Q96PQ1 595 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 HIST1H4GQ99525 98 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 TMEM246Q9BRR3 403 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 BLZF1Q9H2G9 400 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 RGCCQ9H4X1 137 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 RNF167Q9H6Y7 350 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 KLHL21Q9UJP4 597 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 LSM7Q9UK45 103 aaKnown RBP3.37□□□□□ -1.87
CSDE1-211ENST00000525970 UGT2A1Q9Y4X1 527 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 LRRK1Q38SD2 2015 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 FANCIQ9NVI1 1328 aa3.37□□□□□ -1.87
CSDE1-211ENST00000525970 IGHV3OR16-13A0A075B7E8 117 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 LRRIQ3A6PVS8 624 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-211ENST00000525970 HUS1O60921 280 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 CLPXO76031 633 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 SNAI1O95863 264 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-211ENST00000525970 PLEKP08567 350 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-211ENST00000525970 MYL2P10916 166 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 MSR1P21757 451 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 FOXN2P32314 431 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 RORAP35398 523 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 MRPL19P49406 292 aaKnown RBP3.36□□□□□ -1.87
CSDE1-211ENST00000525970 MEOX2P50222 304 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 SLC26A2P50443 739 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 RIPPLY3P57055 190 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 ERVK-25P63136 954 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 MARCH8Q5T0T0 291 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 AADACL4Q5VUY2 407 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 TIGD3Q6B0B8 471 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 TWF2Q6IBS0 349 aaKnown RBP3.36□□□□□ -1.87
CSDE1-211ENST00000525970 ZNF546Q86UE3 836 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 LHFPL3Q86UP9 236 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 PLA2G4DQ86XP0 818 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 ZNF557Q8N988 423 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-211ENST00000525970 NKAPP1Q8N9T2 125 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 RHEBL1Q8TAI7 183 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 ZNF564Q8TBZ8 553 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-211ENST00000525970 OR1E3Q8WZA6 343 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 CCDC126Q96EE4 140 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 PKNOX2Q96KN3 472 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 HSFY1Q96LI6 401 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 GSDMAQ96QA5 445 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 ACTR6Q9GZN1 396 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 ADAP2Q9NPF8 381 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 RSPH14Q9UHP6 348 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 MMP17Q9ULZ9 603 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 ZNF256Q9Y2P7 627 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-211ENST00000525970 MROH7-TTC4A0A0A0MT08 1334 aa3.36□□□□□ -1.87
CSDE1-211ENST00000525970 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms