RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 HOXB1P14653 301 aaPredicted RBP9.53□□□□□ -0.88
PVT1-216ENST00000523068 GRPRP30550 384 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 ACVR1BP36896 505 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 PCBP3P57721 371 aaKnown RBP9.53□□□□□ -0.88
PVT1-216ENST00000523068 PPP2R2BQ00005 443 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 IL1RL1Q01638 556 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 CHRNB3Q05901 458 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 OR1Q1Q15612 314 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 HIKESHIQ53FT3 197 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 INTS11Q5TA45 600 aaKnown RBP9.53□□□□□ -0.88
PVT1-216ENST00000523068 ANKRD16Q6P6B7 361 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 H1FNTQ75WM6 255 aaPredicted RBP9.53□□□□□ -0.88
PVT1-216ENST00000523068 COMTD1Q86VU5 262 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 LSRQ86X29 649 aaPredicted RBP9.53□□□□□ -0.88
PVT1-216ENST00000523068 KDM8Q8N371 416 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 GPR137CQ8N3F9 429 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 SCAIQ8N9R8 606 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 ADPRHL1Q8NDY3 354 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 PIK3C3Q8NEB9 887 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 OR8J3Q8NGG0 315 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 OR1K1Q8NGR3 316 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 ZNF417Q8TAU3 575 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 MAGEE2Q8TD90 523 aaPredicted RBP9.53□□□□□ -0.88
PVT1-216ENST00000523068 RASSF5Q8WWW0 418 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 TAAR8Q969N4 342 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 CLPTM1LQ96KA5 538 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 ZNF587Q96SQ5 575 aaPredicted RBP9.53□□□□□ -0.88
PVT1-216ENST00000523068 KCNS3Q9BQ31 491 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 ASPNQ9BXN1 380 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 CACNG6Q9BXT2 260 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 RSPO3Q9BXY4 272 aaPredicted RBP9.53□□□□□ -0.88
PVT1-216ENST00000523068 MUC13Q9H3R2 512 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 ATP23Q9Y6H3 246 aa9.53□□□□□ -0.88
PVT1-216ENST00000523068 ARPC4-TTLL3A0A0A6YYG9 625 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 RNF223E7ERA6 249 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 FXYD1O00168 92 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 GMNNO75496 209 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 UPK3AO75631 287 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 ZNF432O94892 652 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 APOBEC3AP31941 199 aaPredicted RBP9.52□□□□□ -0.89
PVT1-216ENST00000523068 NUDT6P53370 316 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 MTPNP58546 118 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 DSCR9P59020 149 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 ROR2Q01974 943 aaKnown RBP9.52□□□□□ -0.89
PVT1-216ENST00000523068 RIPK1Q13546 671 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 FLOT2Q14254 428 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 KPNB1Q14974 876 aaKnown RBP9.52□□□□□ -0.89
PVT1-216ENST00000523068 RAB35Q15286 201 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 C3orf36Q3SXR2 165 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 TBRG1Q3YBR2 411 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 C11orf71Q6IPW1 123 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 C8orf82Q6P1X6 216 aaPredicted RBP9.52□□□□□ -0.89
PVT1-216ENST00000523068 PGM2L1Q6PCE3 622 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 ZNF613Q6PF04 617 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 PATL1Q86TB9 770 aaKnown RBP9.52□□□□□ -0.89
PVT1-216ENST00000523068 PTOV1Q86YD1 416 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 UEVLDQ8IX04 471 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 SMYD1Q8NB12 490 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 SLC26A7Q8TE54 656 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 ASB9Q96DX5 294 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 LRGUKQ96M69 825 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 SLC38A2Q96QD8 506 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 MCHR1Q99705 422 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 ARHGDIGQ99819 225 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 KCTD14Q9BQ13 255 aaPredicted RBP9.52□□□□□ -0.89
PVT1-216ENST00000523068 TMEM43Q9BTV4 400 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 REG4Q9BYZ8 158 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 KAT8Q9H7Z6 458 aaKnown RBP9.52□□□□□ -0.89
PVT1-216ENST00000523068 PLCE1Q9P212 2302 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 B3GAT1Q9P2W7 334 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 ABCD2Q9UBJ2 740 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 SEC14L4Q9UDX3 406 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 GDF2Q9UK05 429 aaPredicted RBP9.52□□□□□ -0.89
PVT1-216ENST00000523068 PMF1-BGLAPU3KQ54 211 aa9.52□□□□□ -0.89
PVT1-216ENST00000523068 NSD1Q96L73 2696 aaPredicted RBP9.51□□□□□ -0.89
PVT1-216ENST00000523068 IGKV1D-42A0A075B6H8 117 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 H7C417 338 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 M0QX08 132 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 CHP2O43745 196 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 SSX4O60224 188 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 MGRN1O60291 552 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 MT-ATP6P00846 226 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 CRYAAP02489 173 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 TP53P04637 393 aaPredicted RBP9.51□□□□□ -0.89
PVT1-216ENST00000523068 TCN1P20061 433 aaPredicted RBP9.51□□□□□ -0.89
PVT1-216ENST00000523068 PTNP21246 168 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 CBLP22681 906 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 CDH12P55289 794 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 ACTR3P61158 418 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 LGALS3BPQ08380 585 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 TRAP1Q12931 704 aaKnown RBP9.51□□□□□ -0.89
PVT1-216ENST00000523068 PMS2P3Q13401 168 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 SELPLGQ14242 412 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 DUSP7Q16829 419 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 NANOGP8Q6NSW7 305 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 B3GLCTQ6Y288 498 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 DNM1P46Q6ZS02 220 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 LINGO2Q7L985 606 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 SLC15A3Q8IY34 581 aa9.51□□□□□ -0.89
PVT1-216ENST00000523068 CCDC36Q8IYA8 594 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms