RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 WDR55Q9H6Y2 383 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-210ENST00000522843 SDR39U1Q9NRG7 319 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-210ENST00000522843 PDP1Q9P0J1 537 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-210ENST00000522843 TAGLN3Q9UI15 199 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 RNF11Q9Y3C5 154 aa5.7□□□□□ -1.5
SDCBP-210ENST00000522843 A0A087WZY1 265 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 ERICH4A6NGS2 130 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 PDLIM1O00151 329 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 MANBAO00462 879 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 PIP5K1BO14986 540 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 UBDO15205 165 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 RGS14O43566 566 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 SEMA3DO95025 777 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 UTS2O95399 124 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 NPPAP01160 153 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 MSMBP08118 114 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 ITGA5P08648 1049 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 LINGO3P0C6S8 592 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 PABPC4LP0CB38 370 aaKnown RBP5.69□□□□□ -1.5
SDCBP-210ENST00000522843 IDO1P14902 403 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 RHCEP18577 417 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 ADRA2CP18825 462 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 TSPAN8P19075 237 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 PPOXP50336 477 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 IDH3GP51553 393 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-210ENST00000522843 RAP2BP61225 183 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 NCALDP61601 193 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 SNRPD2P62316 118 aaKnown RBP5.69□□□□□ -1.5
SDCBP-210ENST00000522843 PSPHP78330 225 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 MRPS22P82650 360 aaKnown RBP5.69□□□□□ -1.5
SDCBP-210ENST00000522843 C17orf67Q0P5P2 114 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 FOXF1Q12946 379 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 FOXI1Q12951 378 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 MALLQ13021 153 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 MAD2L1Q13257 205 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-210ENST00000522843 EFNB3Q15768 340 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 ADIPOQQ15848 244 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 PGS1Q32NB8 556 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 COQ5Q5HYK3 327 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 C6orf136Q5SQH8 315 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 CCNYL2Q5T2Q4 361 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 FRG2Q64ET8 278 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 CLEC6AQ6EIG7 209 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 SHQ1Q6PI26 577 aaKnown RBP5.69□□□□□ -1.5
SDCBP-210ENST00000522843 SLC46A3Q7Z3Q1 461 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 C1QL2Q7Z5L3 287 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 MYLK4Q86YV6 388 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-210ENST00000522843 FAM9CQ8IZT9 166 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 PQLC1Q8N2U9 271 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 METTL4Q8N3J2 472 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 BOLLQ8N9W6 283 aaKnown RBP5.69□□□□□ -1.5
SDCBP-210ENST00000522843 GATSQ8NAP1 163 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 C22orf15Q8WYQ4 148 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 HOXB13Q92826 284 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-210ENST00000522843 ATP6V1E2Q96A05 226 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 CPNE4Q96A23 557 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-210ENST00000522843 FCRL1Q96LA6 429 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 MRGPRX4Q96LA9 322 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 PPP3R2Q96LZ3 170 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 MUS81Q96NY9 551 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 DUX5Q96PT3 197 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 FRG2BQ96QU4 278 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 BTBD10Q9BSF8 475 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 ADI1Q9BV57 179 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 SUCNR1Q9BXA5 334 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 BRF2Q9HAW0 419 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 SLC52A3Q9NQ40 469 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 ARL8BQ9NVJ2 186 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 TAS2R1Q9NYW7 299 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 TESQ9UGI8 421 aaKnown RBP5.69□□□□□ -1.5
SDCBP-210ENST00000522843 SNX6Q9UNH7 406 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 MOKQ9UQ07 419 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 TMED5Q9Y3A6 229 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 OR10H1Q9Y4A9 318 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 TIMM22Q9Y584 194 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 ANGPTL3Q9Y5C1 460 aa5.69□□□□□ -1.5
SDCBP-210ENST00000522843 HYDINQ4G0P3 5121 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 ARHGAP32A7KAX9 2087 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 TMEM129A0AVI4 362 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 GXYLT2A0PJZ3 443 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 B9A039 149 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 ANKRD28O15084 1053 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 LSM1O15116 133 aaKnown RBP5.68□□□□□ -1.5
SDCBP-210ENST00000522843 PLOD3O60568 738 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 BCAS2O75934 225 aaPredicted RBP5.68□□□□□ -1.5
SDCBP-210ENST00000522843 RSL1D1O76021 490 aaKnown RBP5.68□□□□□ -1.5
SDCBP-210ENST00000522843 PDE5AO76074 875 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 PSMG1O95456 288 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 PNPP00491 289 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 ELANEP08246 267 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 ALDOCP09972 364 aaKnown RBP5.68□□□□□ -1.5
SDCBP-210ENST00000522843 LINC00032P0C843 101 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 COX4I1P13073 169 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 OSMP13725 252 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 NCF2P19878 526 aaPredicted RBP5.68□□□□□ -1.5
SDCBP-210ENST00000522843 MDKP21741 143 aaPredicted RBP5.68□□□□□ -1.5
SDCBP-210ENST00000522843 GCH1P30793 250 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 SERPINF1P36955 418 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 PRIM2P49643 509 aa5.68□□□□□ -1.5
SDCBP-210ENST00000522843 KHKP50053 298 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms