RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ZPBPQ9BS86 351 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 HHLA2Q9UM44 414 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 ANKRD12Q6UB98 2062 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 E9PI62 339 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 EIF4E2O60573 245 aaKnown RBP14.95□□□□□ -0.02
USP42-207ENST00000521713 ARL3P36405 182 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 ZNF322Q6U7Q0 402 aaPredicted RBP14.95□□□□□ -0.02
USP42-207ENST00000521713 MEPCEQ7L2J0 689 aaKnown RBP14.95□□□□□ -0.02
USP42-207ENST00000521713 RCBTB1Q8NDN9 531 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 YARS2Q9Y2Z4 477 aaKnown RBP14.95□□□□□ -0.02
USP42-207ENST00000521713 TMED7-TICAM2A0A0A6YYA0 188 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 IDSB3KWA1 339 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 S100A11P31949 105 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 ZFAND1Q8TCF1 268 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 CPT1CQ8TCG5 803 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 ZNF566Q969W8 418 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 TMED7Q9Y3B3 224 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 GPX2P18283 190 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 GLB1L2Q8IW92 636 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 LAX1Q8IWV1 398 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 OR56B2PQ8NGI1 322 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 CCL4L1Q8NHW4 92 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 SLC41A2Q96JW4 573 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 C1QTNF3Q9BXJ4 246 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 C11orf54Q9H0W9 315 aaPredicted RBP14.94□□□□□ -0.02
USP42-207ENST00000521713 SMCO4Q9NRQ5 59 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 C5orf67F2Z3F1 127 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 PRKRAO75569 313 aaKnown RBP14.94□□□□□ -0.02
USP42-207ENST00000521713 ASAH1Q13510 395 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 BAK1Q16611 211 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 XKR7Q5GH72 579 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 TMEM71Q6P5X7 295 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 TEX19Q8NA77 164 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 DNAAF1Q8NEP3 725 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 CSNK2A3Q8NEV1 391 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 STEAP2Q8NFT2 490 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 SLC25A43Q8WUT9 341 aaPredicted RBP14.94□□□□□ -0.02
USP42-207ENST00000521713 SLC19A3Q9BZV2 496 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 RCE1Q9Y256 329 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 ZNF175Q9Y473 711 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 LOXL2Q9Y4K0 774 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 RPS10-NUDT3A0A1W2PQS6 291 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 FZD7O75084 574 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 RPS10P46783 165 aaKnown RBP14.94□□□□□ -0.02
USP42-207ENST00000521713 CNN3Q15417 329 aaKnown RBP14.94□□□□□ -0.02
USP42-207ENST00000521713 OR51D1Q8NGF3 324 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 RNF141Q8WVD5 230 aa14.94□□□□□ -0.02
USP42-207ENST00000521713 DDX31Q9H8H2 851 aaKnown RBP14.94□□□□□ -0.02
USP42-207ENST00000521713 TUBAL3A6NHL2 446 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 A8MXE2 369 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 IFNGR1P15260 489 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 ALKAL2Q6UX46 152 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 SSX9Q7RTT3 188 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 SLC16A14Q7RTX9 510 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 STT3BQ8TCJ2 826 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 GLYATL2Q8WU03 294 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 DUS3LQ96G46 650 aaKnown RBP14.93□□□□□ -0.02
USP42-207ENST00000521713 CNTNAP3Q9BZ76 1288 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 ANKRD19PQ9H560 264 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 CDCP1Q9H5V8 836 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 TUBG2Q9NRH3 451 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 SLC23A2Q9UGH3 650 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 C19orf53Q9UNZ5 99 aaPredicted RBP14.93□□□□□ -0.02
USP42-207ENST00000521713 OR2A25A4D2G3 310 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 HTR3BO95264 441 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 SNU13P55769 128 aaKnown RBP14.93□□□□□ -0.02
USP42-207ENST00000521713 NIPAL3Q6P499 406 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 OR5D14Q8NGL3 314 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 RRNAD1Q96FB5 475 aaKnown RBP14.93□□□□□ -0.02
USP42-207ENST00000521713 LSM5Q9Y4Y9 91 aaKnown RBP14.93□□□□□ -0.02
USP42-207ENST00000521713 MYO5AQ9Y4I1 1855 aaKnown RBP14.93□□□□□ -0.02
USP42-207ENST00000521713 DSCR3O14972 297 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 FAM109BQ6ICB4 259 aaPredicted RBP14.93□□□□□ -0.02
USP42-207ENST00000521713 LYPD4Q6UWN0 246 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 MBOAT2Q6ZWT7 520 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 KLHL13Q9P2N7 655 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 MOKQ9UQ07 419 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 A0A1B0GWA3 101 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 ENPP1P22413 925 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 APOOLQ6UXV4 268 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 SLC16A11Q8NCK7 471 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 THOC3Q96J01 351 aaKnown RBP14.93□□□□□ -0.02
USP42-207ENST00000521713 DNAJB11Q9UBS4 358 aa14.93□□□□□ -0.02
USP42-207ENST00000521713 NOSIPQ9Y314 301 aaKnown RBP14.93□□□□□ -0.02
USP42-207ENST00000521713 HMX2A2RU54 273 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 TMEM221A6NGB7 291 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 A8MVM7 634 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 TCRBP04435 133 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 ITGB2P05107 769 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 CARD18P57730 90 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 FAM53BQ14153 422 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 KCNAB1Q14722 419 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 ADPRMQ3LIE5 342 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 ACTBL2Q562R1 376 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 DHRS9Q9BPW9 319 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 ARPC5LQ9BPX5 153 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 SLC25A31Q9H0C2 315 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 QRSL1Q9H0R6 528 aaKnown RBP14.92□□□□□ -0.02
USP42-207ENST00000521713 PIGMQ9H3S5 423 aa14.92□□□□□ -0.02
USP42-207ENST00000521713 DIMT1Q9UNQ2 313 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms