RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SLC25A37Q9NYZ2 338 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 PRELID1Q9Y255 219 aa3.26□□□□□ -1.89
SKP1-208ENST00000521216 RRBP1Q9P2E9 1410 aaKnown RBP3.26□□□□□ -1.89
SKP1-208ENST00000521216 PHF3Q92576 2039 aaKnown RBP3.26□□□□□ -1.89
SKP1-208ENST00000521216 ROCK2O75116 1388 aaKnown RBP3.25□□□□□ -1.89
SKP1-208ENST00000521216 C15orf38-AP3S2A0A0A6YYH1 394 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 CLRN2A0PK11 232 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 LAD1O00515 517 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 LSM1O15116 133 aaKnown RBP3.25□□□□□ -1.89
SKP1-208ENST00000521216 ZNF208O43345 1280 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 TOM1O60784 492 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 ICOSLGO75144 302 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 SNNO75324 88 aaPredicted RBP3.25□□□□□ -1.89
SKP1-208ENST00000521216 ERLIN2O94905 339 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 PRB2P02812 416 aaPredicted RBP3.25□□□□□ -1.89
SKP1-208ENST00000521216 S100A6P06703 90 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 PNMA6AP0CW24 399 aaPredicted RBP3.25□□□□□ -1.89
SKP1-208ENST00000521216 TROVE2P10155 538 aaKnown RBP eCLIP3.25□□□□□ -1.89
SKP1-208ENST00000521216 CCNHP51946 323 aaPredicted RBP3.25□□□□□ -1.89
SKP1-208ENST00000521216 DR1Q01658 176 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 SPIBQ01892 262 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 TNFRSF17Q02223 184 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 LRRC74AQ0VAA2 488 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 PDIA2Q13087 525 aaKnown RBP3.25□□□□□ -1.89
SKP1-208ENST00000521216 DYNC1I2Q13409 638 aaKnown RBP3.25□□□□□ -1.89
SKP1-208ENST00000521216 GGTLC2Q14390 218 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 GPNMBQ14956 572 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 PSG5Q15238 335 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 KLHL38Q2WGJ6 581 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 SFT2D3Q587I9 215 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 THOC7Q6I9Y2 204 aaKnown RBP3.25□□□□□ -1.89
SKP1-208ENST00000521216 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 ZNF621Q6ZSS3 439 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 ZNF546Q86UE3 836 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 ITPRIPQ8IWB1 547 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 SLC7A5P1Q8MH63 180 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 FNDC5Q8NAU1 212 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 ZNF540Q8NDQ6 660 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 STARD4Q96DR4 205 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 ALS2CR12Q96Q35 445 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 NPAS2Q99743 824 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 TRIM4Q9C037 500 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 ZSCAN16Q9H4T2 348 aaPredicted RBP3.25□□□□□ -1.89
SKP1-208ENST00000521216 PARVGQ9HBI0 331 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 ZFP14Q9HCL3 533 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 IL26Q9NPH9 171 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 CCL28Q9NRJ3 127 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 CDH9Q9ULB4 789 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 PAIP2BQ9ULR5 123 aaKnown RBP3.25□□□□□ -1.89
SKP1-208ENST00000521216 RAB26Q9ULW5 256 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 MMP17Q9ULZ9 603 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 TRAPPC4Q9Y296 219 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 HEBP2Q9Y5Z4 205 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 MIA2Q96PC5 1412 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 YEATS2Q9ULM3 1422 aa3.25□□□□□ -1.89
SKP1-208ENST00000521216 MAP3K15Q6ZN16 1313 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 MAPK8IP3Q9UPT6 1336 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 KIR2DL5BA0A0G2JN68 375 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 KIR2DL5BA0A0G2JPC4 375 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 ANKRD63C9JTQ0 380 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 HSD17B6O14756 317 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 LIN7AO14910 233 aaPredicted RBP3.24□□□□□ -1.89
SKP1-208ENST00000521216 PRKAB2O43741 272 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 RAMP3O60896 148 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 ZNF189O75820 626 aaPredicted RBP3.24□□□□□ -1.89
SKP1-208ENST00000521216 DBTP11182 482 aaKnown RBP3.24□□□□□ -1.89
SKP1-208ENST00000521216 HPGDP15428 266 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 CMA1P23946 247 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 GRIA1P42261 906 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 BLVRAP53004 296 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 ATP1B3P54709 279 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 CYTH1Q15438 398 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 EXOC3L2Q2M3D2 409 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 LRRC10Q5BKY1 277 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 FRMPD2BQ6IN97 320 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 C8orf74Q6P047 294 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 Q6ZPB1 254 aaPredicted RBP3.24□□□□□ -1.89
SKP1-208ENST00000521216 UTS2BQ765I0 119 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 THOC6Q86W42 341 aaKnown RBP3.24□□□□□ -1.89
SKP1-208ENST00000521216 KIR2DL5AQ8N109 375 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 LINC00469Q8N7U9 141 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 SPERTQ8NA61 448 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 OR8K1Q8NGG5 319 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 KIR2DL5BQ8NHK3 375 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 TM4SF19Q96DZ7 209 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 NRBF2Q96F24 287 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 COPS8Q99627 209 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 CGREF1Q99674 301 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 TMEM246Q9BRR3 403 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 UQCC2Q9BRT2 126 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 SPZ1Q9BXG8 430 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 UPF3BQ9BZI7 483 aaKnown RBP3.24□□□□□ -1.89
SKP1-208ENST00000521216 GBA3Q9H227 469 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 VCX2Q9H322 139 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 GORASP2Q9H8Y8 452 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 GIN1Q9NXP7 522 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 KCNIP3Q9Y2W7 256 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 PPIP5K1Q6PFW1 1433 aa3.24□□□□□ -1.89
SKP1-208ENST00000521216 SCN2AQ99250 2005 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms