RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 OPN1MW2P0DN77 364 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 OPN1MW3P0DN78 364 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 GNAZP19086 355 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 COX5AP20674 150 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 HRH2P25021 359 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 PSMB4P28070 264 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 AGTR1P30556 359 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 SRD5A2P31213 254 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 FRKP42685 505 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-208ENST00000521037 GTF2A1P52655 376 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-208ENST00000521037 LIM2P55344 173 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 RAB38P57729 211 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 ID2Q02363 134 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 KLHL26Q53HC5 615 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 ELFN2Q5R3F8 820 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 ZNF544Q6NX49 715 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 METTL2BQ6P1Q9 378 aaKnown RBP3.23□□□□□ -1.89
VPS13B-208ENST00000521037 MFSD7Q6UXD7 560 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 KCTD9Q7L273 389 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 PID1Q7Z2X4 250 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 DND1Q8IYX4 353 aaKnown RBP3.23□□□□□ -1.89
VPS13B-208ENST00000521037 ZNF786Q8N393 782 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 ZNF615Q8N8J6 731 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 FADS6Q8N9I5 356 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 ZNF540Q8NDQ6 660 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 STEAP2Q8NFT2 490 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 TRIM58Q8NG06 486 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 OR5L2Q8NGL0 311 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 OR1J2Q8NGS2 313 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 FAM76AQ8TAV0 307 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 HSD17B8Q92506 261 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 P3H4Q92791 437 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 PPWD1Q96BP3 646 aaKnown RBP3.23□□□□□ -1.89
VPS13B-208ENST00000521037 MS4A6EQ96DS6 147 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 METTL2AQ96IZ6 378 aaKnown RBP3.23□□□□□ -1.89
VPS13B-208ENST00000521037 QKIQ96PU8 341 aaKnown RBP eCLIP3.23□□□□□ -1.89
VPS13B-208ENST00000521037 CCT8L2Q96SF2 557 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 DDOQ99489 341 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 EBNA1BP2Q99848 306 aaKnown RBP3.23□□□□□ -1.89
VPS13B-208ENST00000521037 TM2D2Q9BX73 214 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 PINK1Q9BXM7 581 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 CHMP1AQ9HD42 196 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-208ENST00000521037 HINT3Q9NQE9 182 aaKnown RBP3.23□□□□□ -1.89
VPS13B-208ENST00000521037 NECAP2Q9NVZ3 263 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 OR14J1Q9UGF5 321 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 RSPH14Q9UHP6 348 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 KLHL21Q9UJP4 597 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 JRKLQ9Y4A0 524 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 SLC25A15Q9Y619 301 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 SAR1BQ9Y6B6 198 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 CLCA3PQ9Y6N3 262 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 HMCN2Q8NDA2 5059 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 APOBP04114 4563 aaKnown RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 C5orf63A6NC05 138 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 LRIT2A6NDA9 550 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 RBMY1BA6NDE4 496 aaKnown RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 RBMY1EA6NEQ0 496 aaKnown RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 PRR23D1E9PI22 279 aaPredicted RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 H3BQF6 201 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 UGT2B11O75310 529 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 CBR3O75828 277 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 JTBO76095 146 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 PROSCO94903 275 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 NDUFA7O95182 113 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 NGFP01138 241 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 GYPCP04921 128 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 F7P08709 466 aaPredicted RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 CT62P0C5K7 136 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 RHOXF2BP0C7M4 288 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 RBMY1DP0C7P1 496 aaKnown RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 SLC35G6P0C7Q6 338 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 PRR23D2P0DMB1 279 aaPredicted RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 TFPIP10646 304 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 TCP1P17987 556 aaKnown RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 CCNA2P20248 432 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 RPS3P23396 243 aaKnown RBP eCLIP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 CERS1P27544 350 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 MPGP29372 298 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 GRIA1P42261 906 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 CDKN2BP42772 138 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 LINC00205P59089 165 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 VSNL1P62760 191 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 REEP5Q00765 189 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 HMGCS1Q01581 520 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 ZP4Q12836 540 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 POU6F1Q14863 301 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 KRT31Q15323 416 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 SPA17Q15506 151 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 TRADDQ15628 312 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 TAF9Q16594 264 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 C2orf68Q2NKX9 166 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 KLHL38Q2WGJ6 581 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 IQCCQ4KMZ1 466 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 CEP78Q5JTW2 689 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 GGNBP1Q5YKI7 109 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 OLFML2AQ68BL7 652 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 SLC18B1Q6NT16 456 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 UGT3A1Q6NUS8 523 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 ZNF549Q6P9A3 640 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 RAD9BQ6WBX8 426 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms