RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 UQCRFS1P47985 274 aa15.82■□□□□ 0.12
SDC2-205ENST00000520233 PTDSS1P48651 473 aaKnown RBP15.82■□□□□ 0.12
SDC2-205ENST00000520233 PER3P56645 1201 aa15.82■□□□□ 0.12
SDC2-205ENST00000520233 PMPCAQ10713 525 aa15.82■□□□□ 0.12
SDC2-205ENST00000520233 NPRL3Q12980 569 aa15.82■□□□□ 0.12
SDC2-205ENST00000520233 ACKR1Q16570 336 aa15.82■□□□□ 0.12
SDC2-205ENST00000520233 TMEM201Q5SNT2 666 aa15.82■□□□□ 0.12
SDC2-205ENST00000520233 EEF1A1P5Q5VTE0 462 aa15.82■□□□□ 0.12
SDC2-205ENST00000520233 TMEM45BQ96B21 275 aa15.82■□□□□ 0.12
SDC2-205ENST00000520233 INTS12Q96CB8 462 aaKnown RBP15.82■□□□□ 0.12
SDC2-205ENST00000520233 RDH12Q96NR8 316 aa15.82■□□□□ 0.12
SDC2-205ENST00000520233 ZNF385AQ96PM9 386 aaKnown RBP15.82■□□□□ 0.12
SDC2-205ENST00000520233 KATNB1Q9BVA0 655 aa15.82■□□□□ 0.12
SDC2-205ENST00000520233 IFT27Q9BW83 186 aa15.82■□□□□ 0.12
SDC2-205ENST00000520233 TSSK6Q9BXA6 273 aa15.82■□□□□ 0.12
SDC2-205ENST00000520233 POLDIP3Q9BY77 421 aaKnown RBP15.82■□□□□ 0.12
SDC2-205ENST00000520233 ZNF346Q9UL40 294 aaKnown RBP15.82■□□□□ 0.12
SDC2-205ENST00000520233 BAIAP2Q9UQB8 552 aa15.82■□□□□ 0.12
SDC2-205ENST00000520233 SPTA1P02549 2419 aa15.82■□□□□ 0.12
SDC2-205ENST00000520233 A0A1B0GUH1 482 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 BHLHE40O14503 412 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 IMPA2O14732 288 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 ARPC3O15145 178 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 AKAP8O43823 692 aaKnown RBP15.81■□□□□ 0.12
SDC2-205ENST00000520233 IDH3BO43837 385 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 PPP1R3DO95685 299 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 BCL10O95999 233 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 TMIGD3P0DMS9 266 aaPredicted RBP15.81■□□□□ 0.12
SDC2-205ENST00000520233 POU1F1P28069 291 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 AGTR1P30556 359 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 GIPRP48546 466 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 DAP3P51398 398 aaKnown RBP15.81■□□□□ 0.12
SDC2-205ENST00000520233 RPS6KA3P51812 740 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 CLDN17P56750 224 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 RPL27P61353 136 aaKnown RBP15.81■□□□□ 0.12
SDC2-205ENST00000520233 ERVK-25P63136 954 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 CDK5Q00535 292 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 CLEC12AQ5QGZ9 265 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 GPR139Q6DWJ6 353 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 FAM214BQ7L5A3 538 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 FAM122BQ7Z309 247 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 GCNT2Q8N0V5 402 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 OR2T33Q8NG76 320 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 PRR7Q8TB68 274 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 ZNF775Q96BV0 537 aaPredicted RBP15.81■□□□□ 0.12
SDC2-205ENST00000520233 TXNDC15Q96J42 360 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 ADAD1Q96M93 576 aaKnown RBP15.81■□□□□ 0.12
SDC2-205ENST00000520233 SLC25A19Q9HC21 320 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 MED29Q9NX70 200 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 SMPD3Q9NY59 655 aaPredicted RBP15.81■□□□□ 0.12
SDC2-205ENST00000520233 RCE1Q9Y256 329 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 NOSIPQ9Y314 301 aaKnown RBP15.81■□□□□ 0.12
SDC2-205ENST00000520233 EMC9Q9Y3B6 208 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 ADAM18Q9Y3Q7 739 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 IER3IP1Q9Y5U9 82 aa15.81■□□□□ 0.12
SDC2-205ENST00000520233 FAM208BQ5VWN6 2430 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 SVILO95425 2214 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 HSPB2A8KAH6 182 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 H0YJX3 145 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 TXNDC12O95881 172 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 BIDP55957 195 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 FOXF2Q12947 444 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 MELKQ14680 651 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 GINS1Q14691 196 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 PTGES3Q15185 160 aaKnown RBP15.8■□□□□ 0.12
SDC2-205ENST00000520233 HSPB2Q16082 182 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 SNCBQ16143 134 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 ARMC4Q5T2S8 1044 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 FAM205BPQ63HN1 556 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 SLC27A4Q6P1M0 643 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 HDDC2Q7Z4H3 204 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 LNX2Q8N448 690 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 OR6X1Q8NH79 312 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 ASB10Q8WXI3 467 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 RND1Q92730 232 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 ZNF570Q96NI8 536 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 ERMAPQ96PL5 475 aaPredicted RBP15.8■□□□□ 0.12
SDC2-205ENST00000520233 TSPAN32Q96QS1 320 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 TOR3AQ9H497 397 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 RIBC2Q9H4K1 309 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 PARPBPQ9NWS1 579 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 GRHPRQ9UBQ7 328 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 CHD6Q8TD26 2715 aa15.8■□□□□ 0.12
SDC2-205ENST00000520233 ZGRF1Q86YA3 2104 aa15.79■□□□□ 0.12
SDC2-205ENST00000520233 SLC35F4A4IF30 521 aa15.79■□□□□ 0.12
SDC2-205ENST00000520233 ZNF726A6NNF4 738 aa15.79■□□□□ 0.12
SDC2-205ENST00000520233 DLGAP1O14490 977 aa15.79■□□□□ 0.12
SDC2-205ENST00000520233 MRPL33O75394 65 aaKnown RBP15.79■□□□□ 0.12
SDC2-205ENST00000520233 SNAP29O95721 258 aa15.79■□□□□ 0.12
SDC2-205ENST00000520233 CTSSP25774 331 aa15.79■□□□□ 0.12
SDC2-205ENST00000520233 SDHAP31040 664 aa15.79■□□□□ 0.12
SDC2-205ENST00000520233 NTF4P34130 210 aa15.79■□□□□ 0.12
SDC2-205ENST00000520233 POLR2IP36954 125 aaKnown RBP15.79■□□□□ 0.12
SDC2-205ENST00000520233 KIR2DL2P43627 348 aaPredicted RBP15.79■□□□□ 0.12
SDC2-205ENST00000520233 SMSP52788 366 aa15.79■□□□□ 0.12
SDC2-205ENST00000520233 SIRPAP78324 504 aa15.79■□□□□ 0.12
SDC2-205ENST00000520233 TOP3AQ13472 1001 aaPredicted RBP15.79■□□□□ 0.12
SDC2-205ENST00000520233 PGGHGQ32M88 737 aa15.79■□□□□ 0.12
SDC2-205ENST00000520233 ZIK1Q3SY52 487 aaPredicted RBP15.79■□□□□ 0.12
SDC2-205ENST00000520233 C4orf17Q53FE4 359 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms