RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 NMD3Q96D46 503 aaKnown RBP10.13□□□□□ -0.79
SPIDR-212ENST00000519661 MBD6Q96DN6 1003 aa10.13□□□□□ -0.79
SPIDR-212ENST00000519661 BPIFA2Q96DR5 249 aa10.13□□□□□ -0.79
SPIDR-212ENST00000519661 SGTBQ96EQ0 304 aa10.13□□□□□ -0.79
SPIDR-212ENST00000519661 DNAJA3Q96EY1 480 aa10.13□□□□□ -0.79
SPIDR-212ENST00000519661 ZNF347Q96SE7 839 aa10.13□□□□□ -0.79
SPIDR-212ENST00000519661 GPX7Q96SL4 187 aaPredicted RBP10.13□□□□□ -0.79
SPIDR-212ENST00000519661 FNDC11Q9BVV2 318 aa10.13□□□□□ -0.79
SPIDR-212ENST00000519661 MRPL13Q9BYD1 178 aaKnown RBP10.13□□□□□ -0.79
SPIDR-212ENST00000519661 NELFAQ9H3P2 528 aa10.13□□□□□ -0.79
SPIDR-212ENST00000519661 NGBQ9NPG2 151 aa10.13□□□□□ -0.79
SPIDR-212ENST00000519661 TMEM5Q9Y2B1 443 aa10.13□□□□□ -0.79
SPIDR-212ENST00000519661 ALPK2Q86TB3 2170 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 CREBBPQ92793 2442 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 AQP12BA6NM10 295 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 J3KTA2 159 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 CASKO14936 926 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 MGRN1O60291 552 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 SLC43A1O75387 559 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 H1F0P07305 194 aaKnown RBP10.12□□□□□ -0.79
SPIDR-212ENST00000519661 HLA-DOBP13765 273 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 FUT1P19526 365 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 IL32P24001 234 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 FOXG1P55316 489 aaPredicted RBP10.12□□□□□ -0.79
SPIDR-212ENST00000519661 SMIM11AP58511 58 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 LSM11P83369 360 aaKnown RBP eCLIP10.12□□□□□ -0.79
SPIDR-212ENST00000519661 RPL18Q07020 188 aaKnown RBP10.12□□□□□ -0.79
SPIDR-212ENST00000519661 SNTB1Q13884 538 aaKnown RBP10.12□□□□□ -0.79
SPIDR-212ENST00000519661 ARMC4Q5T2S8 1044 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 HDDC2Q7Z4H3 204 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 AQP12AQ8IXF9 295 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 CCDC36Q8IYA8 594 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 KDM8Q8N371 416 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 LRRC17Q8N6Y2 441 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 WDR31Q8NA23 367 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 PFN4Q8NHR9 129 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 TMEM54Q969K7 222 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 SLC25A44Q96H78 314 aaPredicted RBP10.12□□□□□ -0.79
SPIDR-212ENST00000519661 BTBD10Q9BSF8 475 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 SMURF2Q9HAU4 748 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 SLC17A5Q9NRA2 495 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 STX18Q9P2W9 335 aaKnown RBP10.12□□□□□ -0.79
SPIDR-212ENST00000519661 CRNNQ9UBG3 495 aaPredicted RBP10.12□□□□□ -0.79
SPIDR-212ENST00000519661 AMDHD2Q9Y303 409 aa10.12□□□□□ -0.79
SPIDR-212ENST00000519661 MAGED1Q9Y5V3 778 aaPredicted RBP10.12□□□□□ -0.79
SPIDR-212ENST00000519661 AKAP9Q99996 3911 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.11□□□□□ -0.79
SPIDR-212ENST00000519661 SH3PXD2BA1X283 911 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 ZNF587BE7ETH6 402 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 PTP4A3O75365 173 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 UPK3AO75631 287 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 ATP5HO75947 161 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 LYZL6O75951 148 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 KRT36O76013 467 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 PGA4P0DJD7 388 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 PGA3P0DJD8 388 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 ADORA3P0DMS8 318 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 NQO1P15559 274 aaKnown RBP10.11□□□□□ -0.79
SPIDR-212ENST00000519661 TCN1P20061 433 aaPredicted RBP10.11□□□□□ -0.79
SPIDR-212ENST00000519661 OMPP47874 163 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 CLDN17P56750 224 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 MXRA7P84157 204 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 POU3F1Q03052 451 aaPredicted RBP10.11□□□□□ -0.79
SPIDR-212ENST00000519661 FAPQ12884 760 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 C1DQ13901 141 aaKnown RBP10.11□□□□□ -0.79
SPIDR-212ENST00000519661 TESK1Q15569 626 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 NCMAPQ5T1S8 102 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 FAM205BPQ63HN1 556 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 NIPAL3Q6P499 406 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 ANKRD16Q6P6B7 361 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 SLC35D2Q76EJ3 337 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 NANOGNBQ7Z5D8 188 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 DHFR2Q86XF0 187 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 WDFY1Q8IWB7 410 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 NRMQ8IXM6 262 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 OR1K1Q8NGR3 316 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 BCL2L2Q92843 193 aaPredicted RBP10.11□□□□□ -0.79
SPIDR-212ENST00000519661 RADILQ96JH8 1075 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 POLDIP3Q9BY77 421 aaKnown RBP10.11□□□□□ -0.79
SPIDR-212ENST00000519661 TRIM15Q9C019 465 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 GRIP2Q9C0E4 1043 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 CXXC4Q9H2H0 198 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 MMADHCQ9H3L0 296 aaPredicted RBP10.11□□□□□ -0.79
SPIDR-212ENST00000519661 FAM32AQ9Y421 112 aaKnown RBP10.11□□□□□ -0.79
SPIDR-212ENST00000519661 RAI1Q7Z5J4 1906 aaPredicted RBP10.11□□□□□ -0.79
SPIDR-212ENST00000519661 PRR14LQ5THK1 2151 aa10.11□□□□□ -0.79
SPIDR-212ENST00000519661 AKAP6Q13023 2319 aa10.1□□□□□ -0.79
SPIDR-212ENST00000519661 SLC35F4A4IF30 521 aa10.1□□□□□ -0.79
SPIDR-212ENST00000519661 ZNF99A8MXY4 864 aaPredicted RBP10.1□□□□□ -0.79
SPIDR-212ENST00000519661 CDC42EP2O14613 210 aa10.1□□□□□ -0.79
SPIDR-212ENST00000519661 AHCYL1O43865 530 aa10.1□□□□□ -0.79
SPIDR-212ENST00000519661 IGKV3-15P01624 115 aa10.1□□□□□ -0.79
SPIDR-212ENST00000519661 IGLV1-44P01699 117 aa10.1□□□□□ -0.79
SPIDR-212ENST00000519661 IGHV3-9P01782 118 aa10.1□□□□□ -0.79
SPIDR-212ENST00000519661 FABP3P05413 133 aa10.1□□□□□ -0.79
SPIDR-212ENST00000519661 UMPSP11172 480 aa10.1□□□□□ -0.79
SPIDR-212ENST00000519661 APEHP13798 732 aaKnown RBP10.1□□□□□ -0.79
SPIDR-212ENST00000519661 IFNGR1P15260 489 aa10.1□□□□□ -0.79
SPIDR-212ENST00000519661 PAX1P15863 534 aa10.1□□□□□ -0.79
SPIDR-212ENST00000519661 MAKP20794 623 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms