RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	RAB3B	P20337	219 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	GRPR	P30550	384 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	HOXD12	P35452	270 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	NANOS3	P60323	173 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	MADCAM1	Q13477	382 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	IL18	Q14116	193 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	SLC25A35	Q3KQZ1	300 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	CEP78	Q5JTW2	689 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	OR5L2	Q8NGL0	311 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	ZNF519	Q8TB69	540 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	THAP3	Q8WTV1	239 aa	Predicted RBP	11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	TMEM234	Q8WY98	164 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	ST8SIA1	Q92185	356 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	PHYHIP	Q92561	330 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	SLC25A36	Q96CQ1	311 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	SNX18	Q96RF0	628 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	SLC22A4	Q9H015	551 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	C11orf54	Q9H0W9	315 aa	Predicted RBP	11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	SYT4	Q9H2B2	425 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	B3GAT2	Q9NPZ5	323 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	INIP	Q9NRY2	104 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	SACM1L	Q9NTJ5	587 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	MALT1	Q9UDY8	824 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	KLHDC2	Q9Y2U9	406 aa		11.19	□□□□□ -0.62
SPIDR-210	ENST00000519362	ADAMTS9	Q9P2N4	1935 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	PCNX3	Q9H6A9	2034 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	CUL9	Q8IWT3	2517 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	C11orf98	E9PRG8	122 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	NTN3	O00634	580 aa	Predicted RBP	11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	ARHGEF9	O43307	516 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	UPK3A	O75631	287 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	ABHD16A	O95870	558 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	IGHM	P01871	453 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	SUMO3	P55854	103 aa	Predicted RBP	11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	SELENBP1	Q13228	472 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	IL11RA	Q14626	422 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	ACKR1	Q16570	336 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	PHF19	Q5T6S3	580 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	IL20RB	Q6UXL0	311 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	C1orf210	Q8IVY1	113 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	PM20D2	Q8IYS1	436 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	OR6S1	Q8NH40	331 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	TTC9	Q92623	222 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	DNAJA3	Q96EY1	480 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	OR14A2	Q96R54	314 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	GFM1	Q96RP9	751 aa	Known RBP	11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	MNT	Q99583	582 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	CRB3	Q9BUF7	120 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	OR11A1	Q9GZK7	315 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	MRPL39	Q9NYK5	338 aa	Known RBP	11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	NPAP1	Q9NZP6	1156 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	EXTL2	Q9UBQ6	330 aa		11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	MRM2	Q9UI43	246 aa	Known RBP	11.18	□□□□□ -0.62
SPIDR-210	ENST00000519362	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	LINC00854	A0A1B0GVQ3	168 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362		A0A1W2PPK0	400 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	TVP23A	A6NH52	213 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	NOTO	A8MTQ0	251 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	FAM25A	B3EWG3	89 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	FAM25C	B3EWG5	89 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	FAM25G	B3EWG6	89 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362		D6RAR5	112 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	PSMD9	O00233	223 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	ETV2	O00321	342 aa	Predicted RBP	11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	PLPP3	O14495	311 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	OR2T1	O43869	369 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	AKR7A3	O95154	331 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	ZFPL1	O95159	310 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	EIF4E	P06730	217 aa	Known RBP	11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	TACSTD2	P09758	323 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	NPR2	P20594	1047 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	CASP3	P42574	277 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	RPL27	P61353	136 aa	Known RBP	11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	SIGLEC14	Q08ET2	396 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	YIF1B	Q5BJH7	314 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	AGAP6	Q5VW22	663 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	OR5M10	Q6IEU7	315 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	LYPD8	Q6UX82	237 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	UBQLNL	Q8IYU4	475 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	BMPER	Q8N8U9	685 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	CEP76	Q8TAP6	659 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	HAVCR2	Q8TDQ0	301 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	RGP1	Q92546	391 aa	Predicted RBP	11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	C8orf44	Q96CB5	159 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	MAP6	Q96JE9	813 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	ADAD1	Q96M93	576 aa	Known RBP	11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	AGAP4	Q96P64	663 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	KCNJ15	Q99712	375 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	NPAS1	Q99742	590 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	CTRC	Q99895	268 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	TXNIP	Q9H3M7	391 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	GALNT9	Q9HCQ5	603 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	VSX1	Q9NZR4	365 aa	Predicted RBP	11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	MYOT	Q9UBF9	498 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	ZNF281	Q9Y2X9	895 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	FKBP7	Q9Y680	259 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	CPAMD8	Q8IZJ3	1885 aa		11.17	□□□□□ -0.62
SPIDR-210	ENST00000519362	ASCC3	Q8N3C0	2202 aa	Known RBP	11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms