RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 FGF17O60258 216 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 MRPS14O60783 128 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 NDUFS7O75251 213 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 GABARAPO95166 117 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 GADD45GO95257 159 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 NTN1O95631 604 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 OXSR1O95747 527 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 FADS2O95864 444 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 H1F0P07305 194 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 IGFBP1P08833 259 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 SLC35G6P0C7Q6 338 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 CDK4P11802 303 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 NAGAP17050 411 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 CPN2P22792 545 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 PPP2R1BP30154 601 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 NUDT1P36639 197 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 TGFBR2P37173 567 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 PDX1P52945 283 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 NUDT6P53370 316 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 CRISP3P54108 245 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 MLLT10P55197 1068 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 SH3BGRP55822 239 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 RELAQ04206 551 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 EMX1Q04741 257 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 DYNC1I2Q13409 638 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 NR1D2Q14995 579 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 SPCS2Q15005 226 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 LEXMQ3ZCV2 418 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 DEFB134Q4QY38 66 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 KLHL26Q53HC5 615 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 FGD3Q5JSP0 725 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 PRAMEF8Q5VWM4 474 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 PRAMEF7Q5VXH5 474 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 SLX4IPQ5VYV7 408 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 TYW3Q6IPR3 259 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 PLBD1Q6P4A8 553 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 FRRS1Q6ZNA5 592 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 Q6ZTK2 550 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 AHSA2Q719I0 299 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 ZNF367Q7RTV3 350 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 TAF8Q7Z7C8 310 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 VRK2Q86Y07 508 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 TUSC5Q8IXB3 177 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 OR4N5Q8IXE1 308 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 CA13Q8N1Q1 262 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 OR2L13Q8N349 312 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 DNAJC22Q8N4W6 341 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 CSNK1A1LQ8N752 337 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 SLC38A9Q8NBW4 561 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 MORN4Q8NDC4 146 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 OR5T3Q8NGG3 340 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 OR6T1Q8NGN1 323 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 RHOXF1Q8NHV9 184 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 DOK4Q8TEW6 326 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 RND1Q92730 232 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 YIPF6Q96EC8 236 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 PRRC1Q96M27 445 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 TRNT1Q96Q11 434 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 ZNF607Q96SK3 696 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 FUNDC2Q9BWH2 189 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 DGCR6LQ9BY27 220 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 ROGDIQ9GZN7 287 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 LYRM4Q9HD34 91 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 GIN1Q9NXP7 522 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 SEC14L3Q9UDX4 400 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 PSORS1C1Q9UIG5 152 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 PHF11Q9UIL8 331 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 FBXL2Q9UKC9 423 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 DUSP12Q9UNI6 340 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 LIPT1Q9Y234 373 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 PCDHGB1Q9Y5G3 927 aa4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 ARHGEF17Q96PE2 2063 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-212ENST00000518919 CACNA1IQ9P0X4 2223 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 MDC1Q14676 2089 aaKnown RBP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 FANCMQ8IYD8 2048 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 A0A0G2JPF8 293 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 A0A1B0GVG6 124 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 SH3PXD2BA1X283 911 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 ANKUB1A6NFN9 424 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 LILRA5A6NI73 299 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 OR5K4A6NMS3 321 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 ZNF99A8MXY4 864 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 HNRNPCL2B2RXH8 293 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 HNRNPCL3B7ZW38 293 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 FAM90A26D6RGX4 464 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 SGK494L7N484 410 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 CASC3O15234 703 aaKnown RBP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 TPST2O60704 377 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 GALR3O60755 368 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 NOL3O60936 208 aaKnown RBP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 RDH16O75452 317 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 SERPINB7O75635 380 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 UGT2B17O75795 530 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 SOX14O95416 240 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 ZBTB11O95625 1053 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 LGI1O95970 557 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 THY1P04216 161 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 ALPPP05187 535 aa4.33□□□□□ -1.72
CTNNA1-212ENST00000518919 CDK1P06493 297 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms